Christodoulos A. Floudas
Director, Texas A&M Energy Institute,
Erle Nye '59 Chair Professor for Engineering Excellence
Texas A&M University

Stephen C. Macaleer '63 Professor in Engineering and Applied Science, Emeritus
Professor of Chemical and Biological Engineering, Emeritus
Princeton University

302D Williams Administration Bldg
3372 Texas A&M University
College Station, TX 77843-3372
P 979-458-0253
floudas@tamu.edu

Biographical sketch

Christodoulos Achilleus Floudas

Director, Texas A&M Energy Institute
Erle Nye '59 Chair Professor for Engineering Excellence

Texas A&M University
Department of Chemical Engineering
College Station, TX 77843-3372

Work - Texas A&M Energy Institute

  • Office: 302D Williams Administration Building, 3372 Texas A&M University, College Station, TX 77843-3372
  • Tel.: 979-458-0253
  • E-mail: floudas@tamu.edu

Work - Artie McFerrin Department of Chemical Engineering, Texas A&M University

  • Office: Brown Bldg., Artie McFerrin Department of Chemical Engineering, 3122 Texas A&M University, College Station, TX 77843-3122
  • Tel.: 979-845-3568
  • E-mail: floudas@tamu.edu

Position

  • Director, Texas A&M Energy Institute.
  • Erle Nye '59 Chair Professor for Engineering Excellence, Texas A&M University.
  • Stephen C. Macaleer '63 Professor in Engineering and Applied Science, Emeritus, Princeton University.
  • Professor of Chemical and Biological Engineering, Emeritus, Princeton University.

Education

  • Ph.D. in Chemical Engineering, Carnegie Mellon University, 1986. Thesis: "Synthesis and Analysis of Flexible Energy Recovery Systems". Advisor: Professor I. E. Grossmann.
  • Diploma of Chemical Engineering, Aristotle University of Thessaloniki, 1982.

Professional Experience

  • Director, Texas A&M Energy Institute, 2015-present.
  • Erle Nye '59 Chair Professor for Engineering Excellence, Texas A&M University, 2015-present.
  • Stephen C. Macaleer '63 Professor in Engineering and Applied Science, Emeritus, Princeton University.
  • Professor of Chemical and Biological Engineering, Emeritus, Princeton University.
  • Stephen C. Macaleer '63 Professor in Engineering and Applied Science, 2007-2015.
  • George T. Piercy Distinguished Visiting Professor, University of Minnesota, 2008.
  • Professor of Chemical and Biological Engineering, Princeton University, 1994-2015.
  • Director of Graduate Studies in Chemical Engineering, Princeton University, 1994-1998.
  • Faculty Member, Department of Operations Research and Financial Engineering, Princeton University, 2000-2015.
  • Visiting Professor, CPERI, Thessaloniki, Greece, Fall 1998.
  • Visiting Professor, University of Vienna, Austria, Spring 1998.
  • Associate Professor of Chemical Engineering, Princeton University, 1991-1994.
  • Visiting Professor, Imperial College, Fall 1992.
  • Visiting Professor, Swiss Federal Institute of Technology, Spring 1993.
  • Faculty Member, Applied and Computational Mathematics, Princeton University, 1990-2015.
  • Assistant Professor of Chemical Engineering, Princeton University, 1986-1991.

Research Activities

Professor Floudas' research interests are in the area of Chemical Process Systems Engineering and lie at the interface of chemical engineering, applied mathematics, operations research, computer science, and molecular biology. The principal emphasis is on addressing fundamental problems on multi-scale systems engineering for energy, environment, and health. The particular focus is on process synthesis and design, interaction of design and control, process operations, discrete-continuous nonlinear optimization, deterministic global optimization, computational chemistry, structural biology and bioinformatics.

H-index=61; Citations: 11,636
(ISI Web of Science; All Databases; as of December 17, 2015)

H-index=79; Citations: 23,819
(Google scholar; as of December 17, 2015)

Honors and Professional Activities

  • National Academy of Inventors, 2015.
  • P.V. Danckwerts Memorial Lecture, ECCE10+ECAB3+EPIC5, Nice, France, 2015.
  • Academy of Athens, Corresponding Member, 2015.
  • Thomson Reuters Highly Cited Researcher, 2015 (for period 2003-2013; 11 years).
  • Constantin Caratheodory Prize, 2015.
  • The Academy of Medicine, Engineering, and Sciences of Texas, (TAMEST), 2015.
  • Thomson Reuters Highly Cited Researcher, 2014 (for period 2002-2012; 11 years).
  • Honorary Doctorate, Abo Akademi University, Finland, 2014.
  • National Award and HELORS Gold Medal, 2013.
  • AIChE Fellow, 2013.
  • TIAS Fellow and Eminent Scholar, 2013-2014.
  • SIAM Fellow, 2013.
  • One Thousand Global Experts/Talents, China, 2012-2015.
  • National Academy of Engineering, 2011.
  • Chair Professor of Chutian Scholar, Wuhan University of Science and Technology, 2010-2011.
  • Honorary Professor, Hunan University, China, 2009-present.
  • George T. Piercy Distinguished Visiting Professor, University of Minnesota, 2008.
  • Graduate Mentoring Award, Princeton University, 2007.
  • AIChE Computing in Chemical Engineering Award, 2006.
  • AIChE Professional Progress Award, 2001.
  • Aspen Tech Excellence in Teaching Award, 1999.
  • Best Paper Award in Computers & Chemical Engineering, 1998.
  • Bodossaki Foundation Award in Applied Sciences, 1997.
  • Engineering Council Teaching Award, Princeton University, 1995.
  • NSF - Presidential Young Investigator Award, 1988.
  • Bayer Lectureship, Carnegie Mellon University, 2007.
  • George T. Piercy Lectureship, University of Minnesota, 2008.
  • 15th Professor Roger W. H. Sargent Lecture, Imperial College, 2008.
  • CAST Division of AIChE, Director, 1999-2001.
  • Editorial Board of Industrial Engineering Chemistry Research, 1998-2001.
  • Editorial Board of AICHE Journal (Consulting Editors), 2012-present.
  • Editorial Board of Journal of Global Optimization.
  • Editorial Board of Computers & Chemical Engineering, 2001-present.
  • Editorial Board of Book Series Nonconvex Optimization and its Applications.
  • Editorial board of Informatica.
  • Editorial board of Journal of Computational Analysis and Applications.
  • Editorial board of Journal of Industrial and Management Optimization.
  • Editorial Board of Optimization Letters.
  • Editorial Board of Int. J. of Management Science and Engineering Management.
  • Editorial Board of Applied and Computational Mathematics.
  • Editorial Board of Energy Systems.
  • CACHE Corporation, Trustee, 2003-2007.
  • Advisory Board of AICES Graduate School. RTWH Aachen University, 2007-present.
  • National Programming Committee, AIChE-CAST Division Area 10A : Process and Systems Design : Chairman, 1990-1992.
  • American Institute of Chemical Engineers, Member.
  • American Chemical Society, Member.
  • Biophysical Society, Member.
  • Operations Research Society of America, Member.
  • Mathematical Programming Society, Member.
  • Society of Industrial and Applied Mathematics, Member.

Professional Activities: Conferences Organization

  • April 1988 : Operations Research and the Institute of Management Science Meeting, Washington DC, "Nonlinear Programming", session Chairman.
  • November 1988 : Annual AIChE Meeting, Washington DC, "Advances In Optimization", session co-chair.
  • November 1989 : Annual AIChE Meeting, San Francisco, "Advances In Process Synthesis I", session Chair.
  • November 1989 : Annual AIChE Meeting, San Francisco, "Advances In Process Synthesis II", session Chairman.
  • July 1990 : SIAM Annual Meeting, Chicago, "Global Optimization", session Chair.
  • October 1990 : Operations Research Meeting, Philadelphia, "Optimization Applications In Chemical Engineering", session Chair.
  • November 1990 : Annual AIChE Meeting, Chicago, "Process Synthesis I", session Chair.
  • November 1990 : Annual AIChE Meeting, Chicago, "Process Synthesis II", session vice-chair.
  • April 1991 : National AIChE Meeting, Houston, "Tutorial : Heat Exchanger Network Optimization", session chair.
  • May 1991 : Conference on "Recent Advances In Global Optimization", Princeton University, co-organizer.
  • November 1992 : Annual AIChE Meeting, Miami, "Design and Control" session Chair.
  • November 1993 : Annual AIChE Meeting, St. Louis, "Computational Approaches In Process Systems Engineering", session Chairman.
  • April 1995 : "State of the Art in Global Optimization : Computational Methods and Applications" conference, Princeton University, co-organizer.
  • May 1999 : "Optimization in Computational Chemistry and Molecular Biology: Local and Global Approaches" conference, Princeton University, co-organizer.
  • December 2001 : "Metabolic Engineering" Symposium, Princeton University, co-organizer with S. Tilghman.
  • June 2003 : "Frontiers in Global Optimization" conference, Santorini, Greece, co-organizer with P.M. Pardalos.
  • July 2004 : "Foundations of Computer Aided Process Design, FOCAPD-2004" conference, Princeton University, co-organizer with R. Agrawal.
  • June 2007 : "Advances in Global Optimization: Methods and Applications", Myconos, Greece, co-organizer with P.M. Pardalos.
  • June 2010 : "10th International Conference on Bioinformatics and Bioengineering, BIBE-2010", Thomas Jefferson University, co-chair with I. Rigoutsos.
  • July 2011 : "The Second World Conference on Global Optimization in Engineering & Science, WCGO-2011", Chania, Crete, Greece, co-chair with P. M. Pardalos.

University Activities

  • Committee on Sponsored Research, 2014-2015, Princeton University.
  • Committee on Opportunities for Pied-a-terre in NYC, 2013-2014, Princeton University.
  • Computing and Library Committee, 2013-2015, Princeton University.
  • Search Committee for Transformative Chair in Engineering and Life Sciences, Fall 2005, Princeton University.
  • Workshop on "Understanding Complexity in Natural, Social and Economic Systems", co-leader with R. Sircar, Fall 2003, Princeton University.
  • Search Committee for SEAS Dean, 2001-2002, Princeton University.
  • Director of Graduate Studies, 1994-1998, Princeton University.
  • Computing committee, 1986-1992, 2000, Princeton University.
  • Freshmen Advisor, 1988-1994, 1999-2008, Princeton University.
  • Liaison of AIChE Central New Jersey Section, 1986-1990, Princeton University.
  • AIChE Student Chapter Advisor, 1986-1990, Princeton University.
  • Undergraduate committee, 1989-1990, 2001-2005, Princeton University.
  • Engineering and Management Systems program, 1988-2015, Princeton University.
  • Robotics and Intelligent Systems program, 1988-1997, Princeton University.
  • Committee on Examinations and Standing, 1990-1992, Princeton University.

Supervision of Ph.D. Students

  • Granville E. Paules IV - April 1990.
    Current position: Senior Engineer, Aspen Technology.
  • Amy R. Ciric - May 1990.
    Current position: Associate Professor, University of Dayton.
  • Dr. Avanish Aggarwal - October 1990.
    Current position: Process Engineering Supervisor, Bechtel International
  • Dr. Antonis C. Kokossis - May 1992.
    Current position: Professor, National University of Athens, NTUA, Greece.
  • Dr. Polycarpos Psarris - May 1992.
    Current position: Financial Consultant, J.P. Morgan.
  • Dr. Michael L. Luyben - April 1993.
    Current position: Senior Engineer, E.I. du Pont de Nemours.
  • Dr. V. Visweswaran - May 1995.
    Current position: VP of Technology, SCA Technoloies, PA.
  • Dr. Conor M. McDonald - May 1995.
    Current position: Supply Chain Manager, Microsoft, Dublin, Ireland.
  • Dr. Costas D. Maranas - May 1995.
    Current position: Professor, The Pennsylvania State University.
  • Dr. Claire S. Adjiman - May 1998.
    Current position: Professor, Imperial College, England.
  • Dr. Carl A. Schweiger - May 1999.
    Current position: Senior Research Engineer, Pavilion Technologies, TX.
  • Dr. Stephen Harding - December 2000.
    Current position: VP of Engineering, Advanced Process Combinatorics, IN.
  • Dr. Randy Esposito - April 2001.
    Current position: Senior Manager, Nalco Company, IL.
  • Dr. John Klepeis - April 2002.
    Current position: Research Scientist, D.E. Shaw Research, New York, NY.
  • Dr. Heather Schafroth - February 2003.
    Current position: Associate, WilmerHale, Washington DC.
  • Dr. Zeynep H. Gümüş - April 2003.
    Current position: Instructor, Weill Cornell Medical College, Cornell University.
  • Dr. Xiaoxia Lin - April 2003.
    Current position: Assistant Professor, University of Michigan.
  • Dr. Clifford Meyer - February 2004.
    Current position: Research Scientist, Dana Farber Cancer Institute, Harvard University.
  • Dr. Stacy L. Janak - January 2007.
    Current position: Senior Software Engineer, Aspen Technology, TX.
  • Dr. Scott R. McAllister - February 2008.
    Current position: Senior Engineer, ExxonMobil, VA.
  • Dr. Ho Ki Fung - October 2008.
    Current position: Consultant, He-Ro Chemicals, Hong Kong.
  • Dr. Chrysanthos Gounaris - November 2008.
    Current position: Research Associate, Chemical Engineering, Princeton University.
  • Dr. Meng Piao Tan - January 2009.
    Current position: Associate, Pacific Capital.
  • Dr. Rohit Rajgaria - May 2009.
    Current position: Associate, Citibank.
  • Dr. Peter DiMaggio - January 2010.
    Current position: Lecturer, Imperial College.
  • Dr. Peter Verderame - March 2011.
    Current position: Research Scientist, Air Products & Chemicals.
  • Dr. Meghan Bellows - September 2011.
    Current Position: Research Scientist, Sandia National Laboratories.
  • Dr. Ashwin Subramani - October 2011.
    Current Position: Research Scientist, Air Products & Chemicals.
  • Dr. Rich Baliban - September 2012.
    Current Position: Senior Engineer, ExxonMobil
  • Dr. Ruth Misener - September 2012.
    Current Position: Royal Academy of Engineering Fellow, Imperial College.
  • Dr. Josephine Elia - September 2013.
    Current Position: Senior Engineer, UOP.
  • Dr. Eric First - September 2014.
    Current Position: Senior Engineer, Google.
  • Dr. James Smadbeck - December 2014.
    Current Position: Engineer, AspenTech Corp.
  • Dr. George Khoury - May 2015.
    Current Position: Senior Engineering, ExxonMobil.
  • Yannis Guzman - Fifth year student.
  • Alex Niziolek - Fourth year student.
  • Onur Onel - Fourth year student.
  • Logan Matthews - Third year student.
  • Melis Yildirm - Second year student.
  • Burcu Beykal - First year student.
  • Joseph Constandy - First year student.
  • Doga Demirhan - First year student.
  • William Tso - First year student.
  • Utkarsh Shah - Masters Student

Supervision of Post-doctoral Associates

  • Dr. Apostolos Georgiou, December 1988 - July 1990.
    Current position : Section Head, ExxonMobil Corporation, VA.
  • Dr. Vassilios Vassiliadis, October 1993 - October 1994.
    Current position : Senior Lecturer, Department of Chemical Engineering, Cambridge University, UK.
  • Dr. Ioannis Androulakis, November 1993 - May 1996.
    Current position : Associate Professor, Department of Biomedical Engineering, Rutgers University.
  • Dr. Marianthi Ierapetritou, April 1996 - August 1998.
    Current position : Professor, Department of Chemical and Biochemical Engineering, Rutgers University.
  • Dr. Manos Chajakis, October 1999 - April 2000.
    Current position : Associate, Goldman Sachs.
  • Dr. Karl Westerberg, September 1997 - July 2002.
    Current position : Physics Instructor, City College of San Francisco, CA.
  • Dr. Stavros Caratzoulas, July 2001 - July 2002.
    Current position : Research Assistant Professor, Department of Chemical Engineering, University of Delaware.
  • Dr. John Klepeis, June 2002 - July 2003.
    Current position: Research Scientist, D.E. Shaw Research & Development, NY.
  • Dr. Ioannis Akrotirianakis, September 2001 - July 2004.
    Current position: Research Scientist, Siemens Corporation.
  • Dr. Martin Monnigmann, April 2004 - March 2005.
    Current position: Professor, University of Bochum, Germany.
  • Dr. Munawar Shaik Abdul, February 2005 - July 2007.
    Current position: Assistant Professor, IIT New Delhi, India.
  • Dr. Yanjie Wei, February 2008 - July 2011.
    Current Position: Associate Professor, Center for High Performance Computing, Chinese Academy of Sciences, ShenZhen, China.
  • Dr. Jie Li, January 2009 - December 2011.
    Current Position: Professor, Process Engineering Institute, Chinese Academy of Sciences, Beijing, China.
  • Dr. Frances Pereira, April 2011 - April 2012.
    Current Position: Senior Engineer, PSE, London, UK.
  • Dr. Zukui Li, June 2010 - December 2012.
    Current Position: Assistant Professor, Department of Chemical and Materials Engineering, University of Alberta, Canada.
  • Dr. Chrysanthos Gounaris, January 2010 - July 2013. Current Position: Assistant Professor, Department of Chemical, Carnegie Mellon University.
  • Dr. M. M. Faruque Hasan, September 2011 - August 2014. Current Position: Assistant Professor, Department of Chemical Engineering, Texas A&M University
  • Dr. Phanourios Tamamis, January 2013 - January 2015. Current Position: Assistant Professor, Department of Chemical Engineering, Texas A&M Univeristy
  • Dr. Chris A. Kieslich, September 2012 - present.
  • Dr. Fani Boukouvala, November 2012 - present.
  • Dr. Jie Li, April 2013 - present.

Visiting Collaborators

  • Professor Gregory Athanasiu, Summer 1990 and 1991. Professor of Physics, Department of Physics, University of Crete, Greece.
  • Professor Aharon Ben-Tal, Summer 1992. Faculty of Industrial Engineering and Managment, Technion-Israel Institute of Technology, Haifa, Israel.
  • Dr. S. Dallwig: Department of Mathematics, University of Vienna, Vienna, Austria.
  • Eduardo Perez-Cisneros, Department of Chemical Engineering, Technical University of Denmark, Lyngby, Denmark.
  • Dr. Feng-Yuan Chang, September 2001 - April 2002, Department of Industrial Technology, Ministry of Economic Affairs, Taiwan, R.O.C.
  • Professor Oliver Stein, Spring 2006. Department of Mathematics, RTWH Aachen University, Germany.
  • Professor Ernesto Birgin, August 2006 - January 2007. Computer Science Department, University of Sao Paolo, Brazil.
  • Professor Weidong Zhang, April 2007 - March 2008. Department of Chemical Engineering, Jiao Tong University, Shanghai, China.
  • Dr. Nguyen Thi H. Linh, September 2007 - August 2008. Department of Mathematics and Computing Science, University of Natural Science, Vietnam.
  • Professor Qiuhua Tang, September 2008 - August 2009. Department of Industrial Engineering, Wuhan University of Science and Technology, Wuhan, China.
  • Professor Xin Xiao, February 2009 - September 2009. Chinese Academy of Sciences, Engineering Institute, Beijing, China.
  • Professor Ran Ding, July 2010 - July 2011. School of Control Science and Engineering, Shandong University, Jinan, China.
  • Professor Weiwu Yan, December 2010 - December 2011. Shanghai Jiaotong University, Shanghai, China.
  • Professor JiChang Liu, Septemeber 2011 - September 2012. East China University of Science and Technology, Changhai, China.
  • Professor Guilian Liu, January 2013 - January 2014. Xian Jiaotong University, Xian, China.
  • Professor Cuimen Cao, March 2013 - March 2014. East China University of Science and Technology, Shanghai, China.

Academic Collaborations

  • Professor B.R. Barmish: ECE Deptartment, University of Wisconsin, Madison, WI.
    Professor C.V. Hollot: ECE Deptartment, University of Massachusetts, Amherst, MA.
    Dr. R. Tempo: CENS-CNR, Politecnico di Torino, Italy.
    This collaboration is in the area of Robust Control.
  • Professor A. Ben-Tal: Industrial Engineering, Technion, Israel.
    Professor P.M. Pardalos: Industrial Engineering, University of Florida, Gainesville, FL.
    Professor A. Neumaier: Department of Mathematics, University of Vienna, Austria.
    This collaboration is in the area of Global Optimization.
  • Professor James Broach: Deptartment of Molecular Biology, Princeton University, Princeton , NJ.
    This collaboration is in the area of Metabolic Engineering.
  • Professor John Lambris: Deptartment of Pathology & Laboratory Medicine, University of Pennsylvania, Philadelphia, PA.
    Dr. Dimitri Morikis: Deptartment of Chemical and Environmental Engineering, University of California at Riverside, Riverside, CA.
    This collaboration is in the area of NMR Structure Refinement and De Novo Protein Design.
  • Professor H.A. Scheraga: Deptartment of Chemistry, Cornell University, Ithaca, NY.
    This collaboration is in the area of Protein Folding.
  • Professor D. Monos: Department of Pediatrics, University of Pennsylvania, The Children’s Hospital, Philadelphia, PA.
    This collaboration is in the area of Interaction of Peptides.
  • Professor H. Rabitz: Deptartment of Chemistry, Princeton University, Princeton, NJ.
    This collaboration is in the area of Methane Upgrading via Optimal Control.
  • Professor R.F. Siliciano: Medicine and Molecular Biology, Johns Hopkins University School of Medicine, Baltimore, MD.
    This collaboration is in the area of De Novo Design of Inhibitors for HIV-1.
  • Professors H.A. Weinstein, M. Filizola and Dr. M.Y. Niv: Department of Physiology and Biophysics, Weill Cornell Medical College, New York, NY
    This collaboration is in the area of De Novo Design and Structure Prediction of Membrane Proteins.
  • Professor Georgios Archontis: Department of Physics, University of Cyprus.
    This collaboration is in the area of De Novo Design.
  • Professor Dimitra Sakellari: Department of Preventive Dentistry, Periodontology, and Implant Biology, Aristotle University of Thessaloniki.
    This collaboration is in the area of Proteomics Studies and Biomarker Discovery for Preiodontitis.

Industrial Collaborations

  • Mobil Technology Company.
  • Amoco Corporation.
  • E. I. du Pont de Nemours.
  • Eastman Kodak.
  • Shell Laboratorium, Amsterdam, The Netherlands.
  • Exxon Research and Engineering.
  • General Motors Corporation.
  • Delphi Corporation.
  • Atofina Chemicals (Arkema Inc.).
  • Aspen Tech.
  • BASF Chemical Co.
  • Constellation Pharmaceuticals.
  • Lockheed Martin Corporation.
  • Primus Energy.

Books, Monographs

  1. Floudas, C. A.; Pardalos, P. M. A Collection of Test Problems for Constrained Global Optimization Algorithms; Lecture Notes in Computer Science 455; Springer-Verlag, 1990.
  2. Floudas, C. A., Pardalos, P. M., Eds. Recent Advances in Global Optimization; Princeton University Press, 1992.
  3. Floudas, C. A., Ed. Opimization in Chemical Engineering; Annals of Operations Research 42; J.C. Baltzer AG: Basel, Switzerland, 1993.
  4. Floudas, C. A. Nonlinear and Mixed-Integer Optimization: Fundamentals and Applications; Oxford University Press, 1995.
  5. Floudas, C. A., Pardalos, P. M., Eds. State of the Art in Global Optimization: Computational Methods and Advances; Kluwer Academic Publishers, 1996.
  6. Floudas, C. A.; Pardalos, P. M.; Adjiman, C. S.; Esposito, W. R.; Gümüş, Z.; Harding, S. T.; Klepeis, J. L.; Meyer, C. A.; Schweiger, C. A. Handbook of Test Problems for Local and Global Optimization; Kluwer Academic Publishers, 1999.
  7. Floudas, C. A. Deterministic Global Optimization: Theory, Methods and Applications; Kluwer Academic Publishers, 2000.
  8. Floudas, C. A.; Pardalos, P. M. Optimization in Computational Chemistry and Molecular Biology : Local and Global Approaches; Kluwer Academic Publishers, 2000.
  9. Floudas, C. A., Pardalos, P. M., Eds. Encyclopedia of Optimization; Kluwer Academic Publishers, 2001.
  10. Floudas, C. A., Pardalos, P. M., Eds. Frontiers in Global Optimization; Kluwer Academic Publishers, 2003.
  11. Floudas, C. A., Agrawal, R., Eds. Sixth International Conference on Foundations of Computer-Aided Process Design: Discovery Through Product and Process Design; OmniPress, 2004.
  12. Floudas, C. A., Pardalos, P. M., Eds. Encyclopedia of Optimization, 2nd ed.; Springer, 2008.
  13. Rassias, T. M., Floudas, C. A., Butenko, S., Eds. Optimization in Science and Engineering; Springer, 2014.

Chapters in Books

  1. Visweswaran, V.; Floudas, C. A. Global Optimization of Problems with Polynomial Functions In One Variable. In Recent Advances In Global Optimization; Floudas, C. A., Pardalos, P. M., Eds.; Princeton Series in Computer Science; Princeton University Press: Princeton, NJ, 1992; pp 165-200.
  2. Maranas, C. D.; Floudas, C. A. A Global Optimization Method for Weber’s Problem with Attraction and Repulsion. In Large Scale Optimization: State of the Art; Hager, W. W., Hearn, D. W., Pardalos, P. M, Eds.; Kluwer Academic Publishers: Dordrecht, The Netherlands, 1993; pp 259-293.
  3. Floudas, C. A.; Visweswaran, V. Quadratic Optimization. In Handbook of Global Optimization; Horst, R., Pardalos, P. M., Eds.; Kluwer Academic Publishers, 1994; pp 217-270.
  4. Maranas, C. D.; Androulakis, I. P.; Floudas, C. A. A Deterministic Global Optimization Approach for the Protein Folding Problem. In Global Minimization of Nonconvex Energy Functions: Molecular Conformation and Protein Folding; Pardalos, P. M., Shalloway, D., Xue, G., Eds.; DIMACS Series in Discrete Mathematics and Theoretical Computer Science, Vol. 23; American Mathematical Society, 1995; pp 133-150.
  5. Visweswaran, V.; Floudas, C. A. New Formulations and Branching Strategies for the GOP Algorithm. In Global Optimization in Chemical Engineering; Grossmann, I. E., Ed.; Kluwer Academic Publishers, 1996; Chapter 3, pp 75-100.
  6. Visweswaran, V.; Floudas, C. A. Computational Results for an Efficient Implementation of the GOP Algorithm and its Variants. In Global Optimization in Chemical Engineering; Grossman, I. E., Ed.; Kluwer Academic Publishers, 1996; Chapter 4, pp 111-153.
  7. Androulakis, I. P.; Visweswaran, V.; Floudas, C. A. Distributed Decomposition based Approaches in Global Optimization. In State of the Art in Global Optimization : Computational Methods and Applications; Floudas, C. A., Pardalos, P. M., Eds.; Book Series on Nonconvex Optimization and Its Applications; Kluwer Academic Publishers, 1996.
  8. Visweswaran, V.; Floudas, C. A.; Ierapetritou, M. G.; Pistikopoulos, E. N. A Decomposition based Global Optimization Approach for Solving Bilevel Linear and Nonlinear Quadratic Programs. In State of the Art in Global Optimization: Computational Methods and Applications; Floudas, C. A., Pardalos, P. M., Eds.; Book Series on Nonconvex Optimization and Its Applications; Kluwer Academic Publishers, 1996.
  9. Floudas, C. A. Deterministic Global Optimization in Design, Control, and Computational Chemistry. In Large-Scale Optimization with Applications; Biegler, L. T., Conn, A. R., Coleman, T. F., Santosa, F. N., Eds.; The IMA Volumes in Mathematics and its Applications, Vol. 93, Part II: Optimal Design and Control; Springer-Verlag: New York, 1997; pp 129-184.
  10. Schweiger, C. A.; Floudas, C. A. Interaction of Design and Control: Optimization with Dynamic Models. In Optimal Control: Theory, Algorithms, and Applications; Hager, W. W., Pardalos, P. M., Eds.; Kluwer Academic Publishers, 1997; pp 388-435.
  11. Floudas, C. A.; Zlobec, S. Optimality and Duality in Parametric Convex Lexicographic Programming. In Multilevel Optimization: Algorithms and Applications; Migdalas, A., Pardalos, P. M., Varbrand, P., Eds.; Kluwer Academic Publishers, 1998; pp 359-379.
  12. Androulakis, I. P.; Floudas, C. A. Distributed Branch and Bound Algorithms for Global Optimization. In Parallel Processing of Discrete Problems; Pardalos, P. M., Ed.; IMA Volumes in Mathematics and its Applications, Vol. 106; Springer-Verlag, 1998; pp 1-36.
  13. Adjiman, C. S.; Schweiger, C. A.; Floudas, C. A. Mixed-Integer Nonlinear Optimization in Process Synthesis. In Handbook of Combinatorial Optimization; Du, D.-Z., Pardalos, P. M., Eds.; Springer, 1998.
  14. Adjiman, C. S.; Schweiger, C. A.; Floudas, C. A. Nonlinear and Mixed-Integer Optimization in Chemical Process Network Systems. In Network Design: Connectivity and Facilities Location; Pardalos, P. M., Du, D.-Z., Eds.; DIMACS Series in Discrete Mathematics and Theoretical Computer Science, Vol. 40; American Mathematical Society, 1998; pp 429-452.
  15. Floudas, C. A.; Klepeis, J. L.; Pardalos, P. M. Global Optimization Approaches in Protein Folding and Peptide Docking. In Mathematical Support for Molecular Biology; Farach-Colton, M., Roberts, F. S., Vingron, M., Waterman, M., Eds.; DIMACS Series in Discrete Mathematics and Theoretical Computer Science, Vol. 47; American Mathematical Society, 1999; pp 141-171.
  16. Ierapetritou, M. G.; Androulakis, I. P.; Monos, D. S.; Floudas, C. A. Structure Prediction of Binding Sites of MHC Class II Molecules based on the Crystal of HLA-DRB1 and Global Optimization. In Optimization in Computational Chemistry and Molecular Biology; Floudas, C. A., Pardalos, P. M., Eds.; Kluwer Academic Publishers, 2000; pp 157-190.
  17. Klepeis, J. L.; Floudas, C. A. Methodology for Elucidating the Folding Dynamics of Peptides : Met-Enkephalin Case Study. In Optimization in Computational Chemistry and Molecular Biology; Floudas, C. A., Pardalos, P. M., Eds.; Kluwer Academic Publishers, 2000; pp 19-46.
  18. Floudas, C. A. Mixed-Integer Nonlinear Optimization. In Handbook of Applied Optimization; Resende, M., Pardalos, P. M., Eds.; Oxford University Press, 2001; p 451.
  19. Floudas, C. A. Deterministic Global Optimization and Its Applications. In Handbook of Applied Optimization; Resende, M., Pardalos, P. M., Eds.; Oxford University Press, 2001; p 311.
  20. Klepeis, J. L.; Floudas, C. A. Deterministic Global Optimization for Protein Structure Prediction. In Advances in Convex Analysis and Global Optimization, a Book in Honor of C. Caratheodory; Hadjisavvas, N., Pardalos, P. M., Eds.; Springer, 2001; pp 31-74.
  21. Meyer, C. A.; Floudas, C. A. Convex Hull of Trilinear Monomials with Positive or Negative Domains: Facets of the Convex and Concave Envelopes. In Frontiers in Global Optimization; Floudas, C. A., Pardalos, P. M., Eds.; Kluwer Academic Publishers, 2003; pp 327-352.
  22. Schweiger, C. A.; Floudas, C. A. The MINOPT Modeling Language. In Modeling Languages; Kallrath, J., Ed.; Kluwer Academic Publishers, 2003.
  23. McAllister, S. R.; Floudas, C. A. Structure Prediction of Alpha-Helical Proteins. In BIOMAT 2005: International Symposium on Mathematical and Computational Biology; Mondaini, R. P., Dilão, R., Eds.; Springer, 2006; pp 265-288.
  24. Floudas, C. A.; Fung, H. K. Mathematical Modeling and Optimization Methods for De Novo Protein Design. In Systems Biology; Rigoutsos, I., Stephanopoulos, G., Eds.; Oxford University Press, 2007; pp 42-66.
  25. McAllister, S. R.; Rajgaria, R.; Floudas, C. A. A Template-based Mixed-Integer Linear Programming Sequence Alignment Model. In Models and Algorithms for Global Optimization; Torn, A., Zilinskas, J., Eds.; Springer-Verlag, 2007; pp 343-360.
  26. Floudas, C. A.; Kreinovich, V. Towards Optimal techniques for Solving Global Optimization Problems: Symmetry-based Approach. In Models and Algorithms for Global Optimization; Torn, A., Zilinskas, J., Eds.; Springer-Verlag, 2007; pp 21-42.
  27. Floudas, C. A; Fung, H. K.; Morikis, D.; Taylor, M. S.; Zhang, L. Overcoming the Key Challenges in De Novo Protein Design: Enhancing Computational Efficiency and Incorporating True Backbone Flexibility. In BIOMAT 2006: International Symposium on Mathematical and Computational Biology; Mondaini, R. P., Ed.; Springer, 2007; pp 133-183.
  28. DiMaggio, P. A.; McAllister, S. R.; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. Optimal Methods for Re-ordering Matrices in Systems Biology and Drug Discovery Applications. In BIOMAT 2007: International Symposium on Mathematical and Computational Biology; Mondaini, R., Ed.; Springer, 2008; pp 133-183.
  29. Tan, M. P.; Floudas, C. A. A Novel Clustering Approach: Global Optimum Search with Enhanced Positioning. In Clustering Challenges in Biological Networks; Butenko, S., Chaovalitwongse, W. A., Pardalos, P. M., Eds.; World Scientific Publishing, 2009; pp 307-332.
  30. Floudas, C. A.; Gounaris, C. E. An Overview of Advances in Global Optimization during 2003-2008. In Fields Workshop on Global Optimization; Pardalos, P. M., Coleman, T. F., Eds.; Fields Communications Series, Vol. 55; American Mathematical Society, 2009; pp 105-154.
  31. Bellows, M. L.; Fung, H. K.; Floudas., C. A. Recent Advances In De Novo Protein Design. In Process Systems Engineering Vol. 6 Molecular Systems Engineering; Adjiman, C. S., Galindo, A., Eds.; Wiley-VCH, 2010; pp 207-232.
  32. Guzman, Y. A; Hasan, M. M. F.; Floudas, C. A Computational Comparison of Convex Underestimators for Use in a Branch-and-Bound Global Optimization Framework. Optimization in Science and Engineering; Springer, 2014; pp 229-246.

Refereed Journal Publications

  1. Floudas, C. A.; Ciric, A. R.; Grossmann, I. E. Automatic Synthesis of Optimum Heat Exchanger Network Configurations. AIChE Journal 1986, 32, 276.
  2. Floudas, C. A.; Grossmann, I. E. Synthesis of Flexible Heat Exchanger Networks for Multiperiod Operation. Computers and Chemical Engineering 1986, 10 (2), 153-168.
  3. Floudas, C. A.; Grossmann, I. E. Automatic Synthesis of Flexible Heat Exchanger Network Configurations for Multiperiod Operation. ASME Advanced Energy Systems 1986, AES-Vol. 2-1, 75-92.
  4. Floudas, C. A.; Grossmann, I. E. Automatic Synthesis of Multiperiod Heat Exchanger Network Configurations. Computers and Chemical Engineering 1987, 11 (2), 123-143.
  5. Floudas, C. A.; Grossmann, I. E. Synthesis of Flexible Heat Exchanger Networks With Uncertain Flowrates and Temperatures. Computers and Chemical Engineering 1987, 11 (4), 319-336.
  6. Grossmann, I. E.; Floudas, C. A. Active Constraint Strategy for Flexibility Analysis of Chemical Processes. Computers and Chemical Engineering 1987, 11 (6), 675-693.
  7. Floudas, C. A. Separation Synthesis of Multicomponent Feed Streams into Multicomponent Product Streams. AIChE Journal 1987, 33 (4), 540-551.
  8. Paules, G. E. IV; Floudas, C. A. Synthesis of Flexible Distillation Sequences for Multiperiod Operation. Computers and Chemical Engineering 1988, 12 (4), 267-280.
  9. Floudas, C. A.; Paules IV, G. E. A Mixed-Integer Nonlinear Programming Formulation for the Synthesis of Heat-Integrated Distillation Sequences. Computers and Chemical Engineering 1988, 12 (6), 531-546.
  10. Floudas, C. A.; Anastasiadis, S. H. Synthesis of General Distillation Sequences with Several Multicomponent Feeds and Products. Chemical Engineering Science 1988, 43 (9), 2407-2419.
  11. Paules, G. E. IV; Floudas, C. A. APROS: Algorithmic Development Methodology For Discrete-Continuous Optimization Problems. Operations Research Journal 1989, 37 (6), 902-915.
  12. Ciric, A. R.; Floudas, C. A. A Retrofit Approach of Heat Exchanger Networks. Computers and Chemical Engineering 1989, 13 (6), 703-715.
  13. Georgiou, A.; Floudas, C. A. An Optimization Model for the Generic Rank Determination of Structural Matrices. International Journal of Control 1989, 49 (5), 1633-1644.
  14. Georgiou, A.; Floudas, C. A. Structural Analysis and Synthesis of Feasible Control Systems - Theory and Applications. Chemical Engineering Research and Design 1989, 67, 600-618.
  15. Floudas, C. A.; Aggarwal, A.; Ciric, A. R. Global Optimum Search for Nonconvex NLP and MINLP Problems. Computers and Chemical Engineering 1989, 13 (10), 1117-1132.
  16. Floudas, C. A.; Ciric, A. R. Strategies for Overcoming Uncertainties In Heat Exchanger Network Synthesis. Computers and Chemical Engineering 1989, 13 (10), 1133-1152.
  17. Ciric, A. R.; Floudas, C. A. A Mixed-Integer Nonlinear Programming Model For Retrofitting Heat Exchanger Networks. Industrial & Engineering Chemistry Research 1990, 29, 239-251.
  18. Ciric, A. R.; Floudas, C. A. Application of the Simultaneous Match-Network Optimization Approach to the Pseudo-Pinch Problem. Computers and Chemical Engineering 1990, 14 (3), 241-250.
  19. Kokossis, A. C.; Floudas, C. A. Optimization of Complex Reactor Networks: I-Isothermal Operation. Chemical Engineering Science 1990, 43 (3), 595-614.
  20. Georgiou, A.; Floudas, C. A. Structural Properties of Large Scale Systems. International Journal of Control 1990, 51 (1), 169-187.
  21. Aggarwal, A.; Floudas, C. A. Synthesis of General Separation Sequences - Nonsharp Separations. Computers and Chemical Engineering 1990, 14 (6), 631-653.
  22. Floudas, C. A.; Aggarwal, A. A Decomposition Approach for Global Optimum Search In The Pooling Problem. Operations Research Journal On Computing 1990, 2 (3), 225-234.
  23. Ciric, A. R.; Floudas, C. A. A Comprehensive Optimization Model For The Retrofit Of Heat Recovery Networks. Journal of Heat Recovery Systems and CHP 1990, 10 (4), 407-422.
  24. Aggarwal, A.; Floudas, C. A. A Decomposition Approach for Global Optimum Search in QP, NLP and MINLP problems. Annals of Operations Research, Special Volume On Computational methods In Global Optimization 1990, 25,.
  25. Psarris, P.; Floudas, C. A. Improving Dynamic Operability in MIMO Systems with Time Delays. Chemical Engineering Science 1990, 45 (12), 3505-3524.
  26. Floudas, C. A.; Visweswaran, V. A Global Optimization Algorithm (GOP) for Certain Classes of Nonconvex NLPs : I. Theory. Computers and Chemical Engineering 1990, 14 (12), 1397-1417.
  27. Visweswaran, V.; Floudas, C. A. A Global Optimization Algorithm (GOP) for Certain Classes of Nonconvex NLPs : II. Applications of Theory and Test Problems. Computers and Chemical Engineering 1990, 14 (12), 1417-1434.
  28. Kokossis, A. C.; Floudas, C. A. Synthesis of Isothermal Reactor-Separator-Recycle Systems. Chemical Engineering Science 1991, 46 (5/6), 1361-1383.
  29. Ciric, A. R.; Floudas, C. A. Heat Exchanger Network Synthesis Without Decomposition. Computers and Chemical Engineering 1991, 15 (6), 385-396.
  30. Psarris, P.; Floudas, C. A. Dynamic Operability of MIMO Systems with Time Delays and Transmission Zeroes. I. Assessment. Chemical Engineering Science 1991, 46 (10), 2691-2707.
  31. Psarris, P.; Floudas, C. A. Dynamic Operability of MIMO Systems with Time Delays and Transmission Zeroes. II. Enhancement. Chemical Engineering Science 1991, 46 (10), 2709-2728.
  32. Paules, G. E. IV; Floudas, C. A. Stochastic Programming In Process Synthesis : A two-Stage Model with MINLP Recourse for Multiperiod Heat-Integrated Distillation Sequences. Computers and Chemical Engineering 1992, 16 (3), 189-210.
  33. Aggarwal, A.; Floudas, C. A. Synthesis of Heat Integrated Nonsharp Distillation Sequences. Computers and Chemical Engineering 1992, 16 (2), 89-108.
  34. Visweswaran, V.; Floudas, C. A. Unconstrained and Constrained Global Optimization of Polynomial Functions in One Variable. Journal of Global Optimization 1992, 2 (1), 73-99.
  35. Maranas, C. D.; Floudas, C. A. A Global Optimization Approach for Lennard-Jones Microclusters. Journal of Chemical Physics 1992, 97 (10), 7667-7678.
  36. Floudas, C. A.; Visweswaran, V. A Primal-Relaxed Dual Global Optimization Approach. Journal of Optimization 1993, Theory (and its Applications), 187-225.
  37. Visweswaran, V.; Floudas, C. A. New Properties and Computational Improvement of the GOP Algorithm For Problems With Quadratic Objective Function and Constraints. Journal of Global Optimization 1993, 3 (4), 439-462.
  38. Maranas, C. D.; Floudas, C. A. Global Optimization for Molecular Conformation Problems. Annals of Operations Research 1993, 42, 85-117.
  39. Kokossis, A. C.; Floudas, C. A. Stability Issues in Process Synthesis. Computers and Chemical Engineering 1993, 18, S93-S97.
  40. Ierapetritou, M.; Pistikopoulos, E. N.; Floudas, C. A. Operational Planning Under Uncertainty. Computers and Chemical Engineering 1993, 18, S553-S557.
  41. Liu, W. B.; Floudas, C. A. A Remark on the GOP Algorithm for Global Optimization. Journal of Global Optimization 1993, 3 (4), 519-521.
  42. Rojnuckarin, A.; Floudas, C. A.; Rabitz, H.; Yetter, R. A. Optimal Control of a Plug Flow Reactor with a Complex Reaction Mechanism. Journal of Physical Chemistry 1993, 97 (45), 11689-11695.
  43. Maranas, C. D.; Floudas, C. A. Global Minimum Potential Energy Conformations of Small Molecules. Journal of Global Optimization 1994, 4 (2), 135-170.
  44. Kokossis, A. C.; Floudas, C. A. Optimization of Complex Reactor Networks-II: Nonisothermal Operation. Chemical Engineering Science 1994, 49 (7), 1037-1051.
  45. Kokossis, A. C.; Floudas, C. A. Stability in Optimal Design: Synthesis of Complex Reactor Networks. AIChE J. 1994, 40 (5), 849-861.
  46. Maranas, C. D.; Floudas, C. A. A Deterministic Global Optimization Approach for Molecular Structure Determination. Journal of Chemical Physics 1994, 100 (2), 15 January.
  47. Luyben, M. L.; Floudas, C. A. A Multiobjective Optimization Approach for Analyzing the Interaction of Design and Control, Part 1: Theoretical Framework and Binary Distillation Synthesis. Computers and Chemical Engineering 1994, 18 (10), 933-969.
  48. Luyben, M. L.; Floudas, C. A. A Multiobjective Optimization Approach for Analyzing the Interaction of Design and Control, Part 2: Reactor-Separator-Recycle System. Computers and Chemical Engineering 1994, 18 (10), 971-994.
  49. Papalexandri, K. P.; Pistikopoulos, E. N.; Floudas, C. A. Mass Exchange Networks for Waste Minimization: A Simultaneous Approach. Chemical Engineering Research and Design 1994, 72, 279-294.
  50. McDonald, C. M.; Floudas, C. A. Decomposition Based and Branch and Bound Global Optimization Approaches for the Phase Equilibrium Problem. J. of Global Optimization 1994, 5, 205-251.
  51. Maranas, C. D.; Floudas, C. A.; Pardalos, P. M. New Results in the Packing of Equal Circles in a Square. Discrete Mathematics 1995, 142, 287-293.
  52. Liu, W. B.; Floudas, C. A. Convergence of the GOP Algorithm for a Large Class of Smooth Optimization Problems. Journal of Global Optimization 1995, 6, 207.
  53. McDonald, C. M.; Floudas, C. A. Global Optimization for the Phase and Chemical Equilibrium Problem: Application to the NRTL Equation. Computers and Chemical Engineering 1995, 19 (11), 1111-1141.
  54. Psarris, P.; Floudas, C. A. Robust Stability Analysis of Systems with Real Parametric Uncertainty : A Global Optimization Approach. International J. of Robust and Nonlinear Control 1995, 6, 699-717.
  55. McDonald, C. M.; Floudas, C. A. Global Optimization for the Phase Stability Problem. AIChE J. 1995, 41 (7), 1798-1814.
  56. McDonald, C. M.; Floudas, C. A. Global Optimization and Analysis for the Gibbs Free Energy Function for the UNIFAC, Wilson, and ASOG Equations. Industrial & Engineering Chemistry Research 1995, 34, 1674-1687.
  57. Androulakis, I. P.; Maranas, C. D.; Floudas, C. A. αBB: A Global Optimization Method for General Constrained Nonconvex Problems. Journal of Global Optimization 1995, 7 (4), 337-363.
  58. Maranas, C. D.; Floudas, C. A. Finding All Solutions of Nonlinearly Constrained Systems of Equations. Journal of Global Optimization 1995, 7 (2), 143-182.
  59. Liu, W. B.; Floudas, C. A. A Generalized Primal-Relaxed Dual Approach for Global Optimization. Journal of Optimization Theory and its Applications 1996, 90, 417-434.
  60. Rojnuckarin, A.; Floudas, C. A.; Rabitz, H.; Yetter, R. A. Methane Conversion to Ethylene and Acetylene : Optimal Control with Chlorine, Oxygen and Heat Flux. IE&C Fundamentals 1996, 35, 683-696.
  61. Hatzimanikatis, V.; Floudas, C. A.; Bailey, J. E. Analysis and Design of Metabolic Reaction Networks via Mixed-Integer Linear Optimization. AIChE J. 1996, 42, 1277-1292.
  62. Maranas, C. D.; McDonald, C. M.; Harding, S. T.; Floudas, C. A. Locating All Azeotropes in Homogeneous Azeotropic Systems. Computers and Chemical Engineering 1996, 20, S413-418.
  63. Adjiman, C. S.; Androulakis, I. P.; Maranas, C. D.; Floudas, C. A. A Global Optimization Method αBB for Process Design. Computers and Chemical Engineering 1996, 20, S419-424.
  64. Hatzimanikatis, V.; Floudas, C. A.; Bailey, J. E. Optimization of Regulatory Architectures in Metabolic Reaction Networks. Biotechnology and Bioengineering 1996, 52, 485-500.
  65. Adjiman, C. S.; Floudas, C. A. Rigorous Convex Underestimators for General Twice-Differentiable Problems. Journal of Global Optimization 1996, 9, 23-40.
  66. Ierapetritou, M. G.; Pistikopoulos, E. N.; Floudas, C. A. Operational Planning Under Uncertainty. Computers and Chemical Engineering 1996, 20, 1499-1516.
  67. Maranas, C. D.; Androulakis, I. P.; Floudas, C. A.; Berger, A. J.; Mulvey, J. M. Solving Stochastic Control Problems in Finance via Global Optimization. Journal of Economics, Dynamics and Control 1997, 21, 1405-1425.
  68. Maranas, C. D.; Floudas, C. A. Global Optimization in Generalized Geometric Programming. Computers and Chemical Engineering 1997, 21, 351-370.
  69. McDonald, C. M.; Floudas, C. A. GLOPEQ: A New Computational Tool for the Phase and Chemical Equilibrium Problem. Computers and Chemical Engineering 1997, 21, 1-23.
  70. Androulakis, I. P.; Maranas, C. D.; Floudas, C. A. Prediction of Oligopeptide Conformations via Deterministic Global Optimization. Journal of Global Optimization 1997, 11, 1-34.
  71. Vassiliadis, V. S.; Floudas, C. A. The Modified Barrier Function Approach for Large-Scale Optimization. Computers and Chemical Engineering 1997, 21, 855-874.
  72. Harding, S. T.; Maranas, C. D.; McDonald, C. M.; Floudas, C. A. Locating All Homogeneous Azeotropes in Multicomponent Mixtures. Industrial & Engineering Chemistry Research 1997, 36, 160-178.
  73. Harding, S. T.; Floudas, C. A. Global Optimization in Multiproduct and Multipurpose Batch Design Under Uncertainty. Industrial & Engineering Chemistry Research 1997, 36, 1644-1664.
  74. Androulakis, I. P.; Nayak, N. N.; Monos, D. S.; Ierapetritou, M. G.; Floudas, C. A. A Predictive Method for Evaluation of Peptide Binding in Pocket-1 of HLA-DRB1 via Global Minimization of Energy Interactions. Proteins: Structure, Function, and Genetics 1997, 29 (1), 87-102.
  75. Adjiman, C. S.; Androulakis, I. P.; Floudas, C. A. Global Optimization of MINLP Problems in Process Synthesis and Design. Computers and Chemical Engineering 1997, 21, S445-S450.
  76. Klepeis, J. L.; Androulakis, I. P.; Ierapetritou, M. G.; Floudas, C. A. Predicting Solvated Peptide Conformations via Global Minimization of Energetic Atom-to-Atom Interactions. Computers and Chemical Engineering 1998, 22, 765-788.
  77. Adjiman, C. S.; Dallwig, S.; Floudas, C. A.; Neumaier, A. A Global Optimization Method, αBB, for General Twice-Differentiable Constrained NLPs - I. Theoretical Advances. Computers and Chemical Engineering 1998, 22, 1137-1158.
  78. Adjiman, C. S.; Androulakis, I. P.; Floudas, C. A. A Global Optimization Method, αBB, for General Twice-Differentiable Constrained NLPs - II. Implementation and Computational Results. Computers and Chemical Engineering 1998, 22, 1159-1179.
  79. Klepeis, J. L.; Ierapetritou, M. G.; Floudas, C. A. Protein Folding and Peptide Docking: A Molecular Modeling and Global Optimization Approach. Computers and Chemical Engineering 1998, 22, S3-S10.
  80. Esposito, W. R.; Floudas, C. A. Parameter Estimation in Nonlinear Algebraic Models via Global Optimization. Computers and Chemical Engineering 1998, 22, S213-S220.
  81. Ierapetritou, M. G.; Floudas, C. A. Short-term Scheduling: New Mathematical Models vs. Algorithmic Improvements. Computers and Chemical Engineering 1998, 22, S419-S426.
  82. Esposito, W. R.; Floudas, C. A. Global Optimization in Parameter Estimation of Nonlinear Algebraic Models via the Error-In-Variables Approach. Industrial & Engineering Chemistry Research 1998, 37, 1841-1858.
  83. Ierapetritou, M. G.; Floudas, C. A. Effective Continuous-Time Formulation for Short-Term Scheduling. 1. Multipurpose Batch Processes. Industrial & Engineering Chemistry Research 1998, 37, 4341-4359.
  84. Ierapetritou, M. G.; Floudas, C. A. Effective Continuous-Time Formulation for Short-Term Scheduling. 2. Continuous and Semicontinuous Processes. Industrial & Engineering Chemistry Research 1998, 37, 4360-4374.
  85. Schweiger, C. A.; Floudas, C. A. Optimization Framework for the Synthesis of Chemical Reactor Networks. Industrial & Engineering Chemistry Research 1999, 38, 744-766.
  86. Klepeis, J. L.; Floudas, C. A. A Comparative Study of Global Minimum Energy Conformations of Hydrated Peptides. Journal of Computational Chemistry 1999, 20, 636-654.
  87. Westerberg, K. M.; Floudas, C. A. Locating All Transition States and Studying Reaction Pathways of Potential Energy Surfaces. Journal of Chemical Physics 1999, 110, 9259-9296.
  88. Klepeis, J. L.; Floudas, C. A. Free Energy Calculations for Peptides via Deterministic Global Optimization. Journal of Chemical Physics 1999, 110, 7491-7512.
  89. Ierapetritou, M. G.; Floudas, C. A.; Vasantharajan, S.; Cullick, A. S. Optimal Location of Vertical Wells: A Decomposition Approach. AIChE Journal 1999, 45, 844-859.
  90. Ierapetritou, M. G.; Hene, T. S.; Floudas, C. A. Effective Continuous-Time Formulation for Short Term Scheduling. 3. Multiple Intermediate Due Dates. Industrial & Engineering Chemistry Research 1999, 38 (9), 3446-3461.
  91. Klepeis, J. L.; Floudas, C. A.; Morikis, D.; Lambris, J. D. Predicting Peptide Structures Using NMR Data and Deterministic Global Optimization. Journal of Computational Chemistry 1999, 20 (13), 1354-1370.
  92. Schweiger, C. A.; Floudas, C. A. Synthesis of Optimal Chemical Reactor Networks. Computers and Chemical Engineering 1999, S47-50.
  93. Ierapetritou, M. G.; Hene, T. S.; Floudas, C. A. Short-Term Scheduling of Batch Plants with Multiple Intermediate Due Dates. Computers and Chemical Engineering 1999, 23, S515-518.
  94. Floudas, C. A. Recent Advances in Global Optimization for Process Synthesis, Design and Control: Enclosure of All Solutions. Computers and Chemical Engineering 1999, S963-973.
  95. Hertz, D.; Adjiman, C. S.; Floudas, C. A. Two results on bounding the roots of interval polynomials. Computers and Chemical Engineering 1999, 23, 1333-1339.
  96. Westerberg, K. M.; Floudas, C. A. Dynamics of Peptide Folding: Transition States and Reaction Pathways of Solvated and Unsolvated Tetra-Alanine. Journal of Global Optimization 1999, 15, 261-297.
  97. Adjiman, C. S.; Androulakis, I. P.; Floudas, C. A. Global Optimization of Mixed Integer Nonlinear Problems. AIChE Journal 2000, 46, 1769-1797.
  98. Harding, S. T.; Floudas, C. A. Phase Stability with Cubic Equations of State: A Global Optimization Approach. AIChE Journal 2000, 46 (7), 1422-1440.
  99. Harding, S. T.; Floudas, C. A. Locating Heterogeneous and Reactive Azeotropes. Industrial & Engineering Chemistry Research 2000, 39 (6), 1576-1595.
  100. Esposito, W. R.; Floudas, C. A. Global Optimization for the Parameter Estimation of Differential-Algebraic Systems. Industrial & Engineering Chemistry Research 2000, 39 (5), 1291-1310.
  101. Esposito, W. R.; Floudas, C. A. Deterministic Global Optimization in Nonlinear Optimal Control Problems. Journal of Global Optimization 2000, 17, 97-126.
  102. Klepeis, J. L.; Floudas, C. A. Deterministic Global Optimization and Torsion Angle Dynamics for Molecular Structure Prediction. Computers and Chemical Engineering 2000, 24, 1761-1766.
  103. Floudas, C. A. Global Optimization In Design and Control of Chemical Process Systems. Journal of Process Control 2000, 10 (2-3), 125-134.
  104. Faliks, A.; Yetter, R. A.; Floudas, C. A.; Hall, R.; Rabitz, H. Optimal Control of Methane Conversion to Ethylene. Journal of Physical Chemistry A 2000, 104, 10740-10746.
  105. Gümüş, Z. H.; Floudas, C. A. Global Optimization of Nonlinear Bilevel Programming Problems. Journal of Global Optimization 2001, 20, 1-31.
  106. Floudas, C. A.; Gümüş, Z. H.; Ierapetritou, M. G. Global Optimization in Design Under Uncertainty: Feasibility Test and Flexibility Index Problems. Industrial & Engineering Chemistry Research 2001, 40, 4267-4282.
  107. Lin, X.; Floudas, C. A. Design, Synthesis and Scheduling of Multipurpose Batch Plants via an Effective Continuous-Time Formulation. Computers and Chemical Engineering 2001, 25, 665-674.
  108. Esposito, W. R.; Floudas, C. A. Rebuttal to Comments on “Global Optimization for the Parameter Estimation of Differential Algebraic System”. Industrial & Engineering Chemistry Research 2001, 40, 490-491.
  109. Faliks, A.; Yetter, R. A.; Floudas, C. A.; Wei, Y.; Rabitz, H. Optimization of Living Polymerization Through Distributed Control of a Nitroxide Radical. POLYMER 2001, 42, 2061-2065.
  110. Faliks, A.; Yetter, R. A.; Floudas, C. A.; Bernasek, S. L.; Fransson, M.; Rabitz, H. Optimal Control of Catalytic Methanol Conversion to Formaldehyde. Journal of Physical Chemistry A 2001, 105, 2099-2105.
  111. Ierapetritou, M. G.; Floudas, C. A. Comments on “An Improved RTN Continuous-Time Formulation for the Short-Term Scheduling of Multipurpose Batch Plants”. Industrial & Engineering Chemistry Research 2001, 40, 5040-5041.
  112. Faliks, A.; Yetter, R. A.; Floudas, C. A.; Wei, Y.; Rabitz, H. Optimization of Living Radical Polymerization Through Distributed Control of Energy. Macromolecular Chemistry and Physics 2001, 202 (13), 2797-2801.
  113. Klepeis, J. L.; Schafroth, H. D.; Westerberg, K. M.; Floudas, C. A. Deterministic Global Optimization and Ab Initio Approaches for the Structure Prediction of Polypeptides, Dynamics of Protein Folding and Protein-Protein Interactions. Advances in Chemical Physics 2002, 120, 265-457.
  114. Esposito, W. R.; Floudas, C. A. Deterministic Global Optimization in Isothermal Reactor Network Synthesis. Journal of Global Optimization 2002, 22, 59-95.
  115. Klepeis, J. L.; Floudas, C. A. Ab Initio Prediction of Helical Segments in Polypeptides. Journal of Computational Chemistry 2002, 23, 245-266.
  116. Lin, X.; Floudas, C. A.; Modi, S.; Juhasz, N. M. Continuous-Time Optimization Approach for Medium-Range Production Scheduling of a Multiproduct Batch Plant. Industrial & Engineering Chemistry Research 2002, 41, 3884-3906.
  117. Meyer, C. A.; Floudas, C. A.; Neumaier, A. Global Optimization with Non-Factorable Constraints. Industrial & Engineering Chemistry Research 2002, 41, 6413-6424.
  118. Faliks, A.; Yetter, R. A.; Floudas, C. A.; Wei, Y.; Rabitz, H. Optimization of Polymer Synthesis Through Distributed Control of Polymerization Conditions. Journal of Applied Polymer Science 2002, 85 (14), 2922-2928.
  119. Lin, X.; Floudas, C. A. A Novel Continuous-Time Modeling and Optimization Framework for Well Platform Planning Problems. Optimization and Engineering 2003, 4, 65-95.
  120. Klepeis, J. L.; Floudas, C. A. Prediction of Beta-Sheet Topology and Disulfide Bridges in Polypeptides. Journal of Computational Chemistry 2003, 24, 191-208.
  121. Klepeis, J. L.; Floudas, C. A. Ab Initio Tertiary Structure Prediction of Proteins. Journal of Global Optimization 2003, 25, 113-140.
  122. Lin, X.; Chajakis, E. D.; Floudas, C. A. Scheduling of Tanker Lightering via a Novel Continuous-Time Optimization Framework. Industrial & Engineering Chemistry Research 2003, 42, 4441-4451.
  123. Klepeis, J. L.; Pieja, M.; Floudas, C. A. A New Class of Hybrid Global Optimization Algorithms for Peptide Structure Prediction: Integrated Hybrids. Computer Physics Communications 2003, 151, 121-140.
  124. Klepeis, J. L.; Pieja, M.; Floudas, C. A. A New Class of Hybrid Global Optimization Algorithms for Peptide Structure Prediction: Alternating Hybrids and Application fo Met-Enkephalin and Melittin. Biophysical Journal 2003, 84, 869-882.
  125. Klepeis, J. L.; Floudas, C. A.; Morikis, D.; Tsokos, C. G.; Argyropoulos, E.; Spruce, L.; Lambris, J. D. Integrated Computational and Experimenal Approach for Lead Optimization and Design of Compstatin Variants with Improved Activity. Journal of the American Chemical Society 2003, 125 (28), 8422-8423.
  126. Klepeis, J. L.; Floudas, C. A. ASTRO-FOLD: a combinatorial and global optimization framework for ab initio prediction of three-dimensional structures of proteins from the amino acid sequence. Biophysical Journal 2003, 85, 2119-2146.
  127. Lin, X.; Floudas, C. A.; Wang, Y.; Broach, J. R. Theoretical and Computational Studies of the Glucose Signaling Pathways in Yeast Using Global Gene Expression Data. Biotechnology and Bioengineering 2003, 84, 864-886.
  128. Meyer, C. A.; Floudas, C. A. Convex Hull of Trilinear Monomials with Mixed Sign Domains. Journal of Global Optimization 2004, 29 (2), 125-155.
  129. Floudas, C. A.; Lin, X. Continuous-Time versus Discrete-Time Approaches for Scheduling of Chemical Processes: A Review. Computers and Chemical Engineering 2004, 28 (11), 2109-2129.
  130. Akrotirianakis, I. G.; Floudas, C. A. A New Class of Improved Convex Underestimators for Twice Continuously Differentiable Constrained NLPs. Journal of Global Optimization 2004, 30 (4), 367-390.
  131. Caratzoulas, S.; Floudas, C. A. Trigonometric Convex Underestimator for the Base Functions in Fourier Space. Journal of Optimization Theory and Applications 2004, 124 (2), 339-362.
  132. Lin, X.; Janak, S. L.; Floudas, C. A. A New Robust Optimization Approach for Scheduling under Uncertainty: I. Bounded Uncertainty. Computers and Chemical Engineering 2004, 28, 1069-1085.
  133. Loose, C.; Klepeis, J. L.; Floudas, C. A. A New Pairwise Folding Potential Based on Improved Decoy Generation and Side-Chain Packing. Proteins 2004, 54, 303-314.
  134. Klepeis, J. L.; Floudas, C. A.; Morikis, D.; Lambris, J. D. Design of Peptide Analogs with Improved Activity using a Novel de novo Protein Design Approach. Industrial & Engineering Chemistry Research 2004, 43, 3817-3826.
  135. Schafroth, H. D.; Floudas, C. A. Predicting peptide binding to MHC pockets via molecular modeling, implicit solvation, and global optimization. Proteins 2004, 54, 534-556.
  136. Akrotirianakis, I. G.; Floudas, C. A. Computational Experience with a New Class of Convex Underestimators: Box Constrained NLP Problems. Journal of Global Optimization 2004, 29 (3), 249-264.
  137. Morikis, D.; Soulika, A. M.; Mallik, B.; Klepeis, J. L.; Floudas, C. A.; Lambris, J. D. Improvement of the anti-C3 activity of complement using rational and combinatorial approaches. Biochemical Society Transactions 2004, 32, 28-32.
  138. Janak, S. L.; Lin, X.; Floudas, C. A. Enhanced Continuous-Time Unit-Specific Event Based Formulation for Short-Term Scheduling of Multipurpose Batch Processes: Resource Constraints and Mixed Storage Policies. Industrial & Engineering Chemistry Research 2004, 43, 2516-2533.
  139. Floudas, C. A.; Lin, X. Mixed Integer Linear Programming in Process Scheduling: Modeling, Algorithms, and Applications. Annals of Operations Research 2005, 139 (1), 131-162.
  140. Lin, X.; Floudas, C. A.; Kallrath, J. Global Solution Approach for a Nonconvex MINLP Problem in Product Portfolio Optimization. Journal of Global Optimization 2005, 32, 417-431.
  141. Floudas, C. A.; Th. Jongen, H. Global Optimization: Local Minima and Transition Points. Journal of Global Optimization 2005, 32, 409-415.
  142. Gümüş, Z. H.; Floudas, C. A. Global Optimization of Mixed-Integer Bilevel Programming Problems. Journal of Computational Management and Optimization 2005, 2 (3), 181-212.
  143. Klepeis, J. L.; Wei, Y.; Hecht, M. H.; Floudas, C. A. Ab Initio Prediction of the 3-Dimensional Structure of a De Novo Designed Protein: A Double Blind Case Study. Proteins 2005, 58, 560-570.
  144. Meyer, C. A.; Floudas, C. A. Convex underestimation of twice continuously differentiable functions by piecewise quadratic perturbation: Spline αBB underestimators. Journal of Global Optimization 2005, 32 (2), 221-258.
  145. Klepeis, J. L.; Floudas, C. A. Analysis and Prediction of Loop Segments in Protein Structures. Computers and Chemical Engineering 2005, 29, 423-436.
  146. Meyer, C. A.; Floudas, C. A. Convex Envelopes for Edge-Concave Functions. Mathematical Programming 2005, 103 (2), 207-224.
  147. Floudas, C. A.; Akrotirianakis, I. G.; Caratzoulas, S.; Meyer, C. A.; Kallrath, J. Global Optimization in the 21st Century: Advances and Challenges. Computers and Chemical Engineering 2005, 29 (6), 1185-1202.
  148. Floudas, C. A.; Fung, H. K.; McAllister, S. R.; Monnigmann, M.; Rajgaria, R. Advances in Protein Structure Prediction and De Novo Protein Design: A Review. Chemical Engineering Science 2005, 61, 966-988.
  149. Floudas, C. A.; Janak, S. L. Comments on “New General Continuous-Time State Task Network Formulation for Short-Term Scheduling of Multipurpose Batch Plants” and on “Enhanced Continuous Time Unit Specific Event Based Formulation for Short Term Scheduling of Multipurpose Batch Processes”. Industrial & Engineering Chemistry Research 2005, 44, 1985-1986.
  150. Fung, H. K.; Rao, S.; Floudas, C. A.; Prokopyev, O.; Pardalos, P. M.; Rendl, F. Computational Comparison Studies of Quadratic Assignment Like Formulations for the In Silico Sequence Selection Problem in De Novo Protein Design. Journal of Combinatorial Optimization 2005, 10, 41-60.
  151. Monnigmann, M.; Floudas, C. A. Protein Loop Structure Prediction with Flexible Stem Geometries. Proteins 2005, 61, 748-762.
  152. Floudas, C. A. Research Challenges, Opportunities and Synergism in Systems Engineering and Computational Biology. AIChE Journal 2005, 51 (7), 1872-1884.
  153. Morikis, D.; Floudas, C. A.; Lambris, J. D. Structure-based integrative computational and experimental approach for the optimization of drug design. Lecture Notes in Computer Science 2005, 3515, 680-688.
  154. Meyer, C.; Floudas, C. A. Global Optimization of a Combinatorially Complex Generalized Pooling Problem. AIChE Journal 2006, 52 (3), 1027-1037.
  155. Janak, S. L.; Taylor, M.; Floudas, C. A.; Burka, M.; Mountziaris, T. J. A Novel and Effective Integer Optimization Approach for the NSF Panel Assignment Problem: A Mutli-Resource and Preference-Constrained Generalized Assignment Problem. Industrial & Engineering Chemistry Research 2006, 45 (1), 258-265.
  156. Janak, S. L.; Floudas, C. A.; Kallrath, J.; Vormbrock, N. Production Scheduling of a Large-Scale Industrial Batch Plant. I. Short-Term and Medium-Term Scheduling. Industrial & Engineering Chemistry Research 2006, 45 (25), 8234-8252.
  157. Janak, S. L.; Floudas, C. A.; Kallrath, J.; Vormbrock, N. Production Scheduling of a Large-Scale Industrial Batch Plant. II. Reactive Scheduling. Industrial & Engineering Chemistry Research 2006, 45 (25), 8253-8269.
  158. McAllister, S. R.; Mickus, B. E.; Klepeis, J. L.; Floudas, C. A. A Novel Approach for Alpha-Helical Topology Prediction in Globular Proteins: Generation of Interhelical Restraints. Proteins 2006, 65, 930-952.
  159. Shaik, M. A.; Janak, S. L.; Floudas, C. A. Continuous-Time Models for Short-Term Scheduling of Multipurpose Batch Plants: A Comparative Study. Industrial & Engineering Chemistry Research 2006, 45 (18), 6190-6209.
  160. Rajgaria, R.; McAllister, S. R.; Floudas, C. A. A Novel High Resolution Cα-Cα Distance Dependent Force Field Based on a High Quality Decoy Set. Proteins 2006, 65 (3), 726-741.
  161. Gounaris, C. E.; Floudas, C. A.; Wei, J. Rational Design of Shape Selective Separation and Catalysis: I. Concepts and Analysis. Chemical Engineering Science 2006, 61 (24), 7933-7948.
  162. Gounaris, C. E.; Wei, J.; Floudas, C. A. Rational Design of Shape Selective Separation and Catalysis: II. Mathematical Model and Computational Studies. Chemical Engineering Science 2006, 61 (24), 7949-7962.
  163. Floudas, C. A.; Kreinovich, V. On the Functional Form of Convex Underestimators for Twice Continuously Differentiable Functions. Optimization Letters 2007, 1 (2), 187-192.
  164. Janak, S. L.; Lin, X.; Floudas, C. A. A New Robust Optimization Approach for Scheduling under Uncertainty: II. Uncertainty with Known Probability Distribution. Computers and Chemical Engineering 2007, 31, 171-195.
  165. McAllister, S. R.; Rajgaria, R.; Floudas, C. A. Global Pairwise Sequence Alignment Through Mixed-Integer Linear Programming: A Template-Free Approach. Optimization Methods and Software 2007, 22 (1), 127-144.
  166. Fung, H. K.; Taylor, M. S.; Floudas, C. A. Novel Formulations for the Sequence Selection Problem in de Novo Protein Design with Flexible Templates. Optimization Methods and Software 2007, 22 (1), 51-71.
  167. DiMaggio, P. A.; Floudas, C. A. A mixed-integer optimization framework for de novo peptide identification. AIChE Journal 2007, 53 (1), 160-173.
  168. Shaik, M. A.; Floudas, C. A. An Improved Unit-Specific-Event based Continuous-Time Model for Short-Term Scheduling of Continuous Processes: Rigorous Treatment of Storage Requirements. Industrial & Engineering Chemistry Research 2007, 46, 1764-1779.
  169. Floudas, C. A.; Stein, O. The Adaptive Convexification Algorithm: A Feasible Point Method for Semi-Infinite Programming. SIAM Journal of Optimization 2007, 18 (4), 1187-1208.
  170. Tan, M. P.; Broach, J. R.; Floudas, C. A. A Novel Clustering Approach and Prediction of Optimal Number of Clusters: Global Optimum Search with Enhanced Positioning. J. Global Optimization 2007, 39, 323-346.
  171. Tan, M. P.; Broach, J. R.; Floudas, C. A. Evaluation of Normalization and Pre-Clustering Issues in a Novel Clustering Approach: Global Optimum Search with Enhanced Positioning. Journal of Bioinformatics and Computational Biology 2007, 5 (4), 895-913.
  172. DiMaggio, P. A.; Floudas, C. A. De Novo Peptide Identification via Tandem Mass Spectrometry and Integer Linear Optimization. Analytical Chemistry 2007, 79, 1433-1466.
  173. Floudas, C. A. Computational Methods in Protein Structure Prediction. Biotechnology and Bioengineering 2007, 97, 207-213.
  174. McAllister, S. R.; Rajgaria, R.; Floudas, C. A. A Path Selection Approach to Global Pairwise Sequence Alignment using Integer Linear Optimization. Optimization 2008, 57, 101-111.
  175. Janak, S. L.; Floudas, C. A. Improving Unit-Specific Event Based Continuous-Time Approaches for Batch Processes: Integrality Gap and Task Splitting. Computers and Chemical Engineering 2008, 32 (4-5), 913-955.
  176. Li, H.-L.; Tsai, J.-F.; Floudas, C. A. Convex Underestimation for Posynomial Functions of Positive Variables. Optimization Letters 2008, 2 (3), 333-340.
  177. Shaik, M. A.; Floudas, C. A. Unit-Specific-Event based Continuous-Time Approach for Short-Term Scheduling of Batch Plants using RTN Framework. Computers and Chemical Engineering 2008, 32, 260-274.
  178. Rajgaria, R.; McAllister, S. R.; Floudas, C. A. Distance Dependent Centroid to Centroid Force Fields using High Resolution Decoys. Proteins 2008, 70, 950-970.
  179. Gounaris, C. E.; Floudas, C. A. Tight Convex Underestimators for C2-Continuous Problems: I. Univariate Functions. J. Global Optimization 2008, 42, 51-67.
  180. Gounaris, C. E.; Floudas, C. A. Tight Convex Underestimators for C2-Continuous Problems: II. Multivariate Functions. J. Global Optimization 2008, 42, 69-89.
  181. Fung, H. K.; Welsh, W. J.; Floudas, C. A. Computational De Novo Peptide and Protein Design: Rigid Templates versus Flexible Templates. Industrial & Engineering Chemistry Research 2008, 47, 993-1001.
  182. Fung, H. K.; Floudas, C. A; Taylor, M. S.; Zhang, L.; Morikis, D. Towards Full Sequence De Novo Protein Design with Flexible Templates for Human Beta-Defensin-2. Biophysical J. 2008, 94, 584-599.
  183. Gounaris, C. E.; Floudas, C. A. Convexity of Products of Univariate Functions and Convexification Transformations for Geometric Programming. J. Opt. Theory and App. 2008, 138 (1), 407-427.
  184. DiMaggio, P. A.; McAllister, S. R.; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. Biclustering via Optimal Re-ordering of Data Matrices in Systems Biology: Rigorous Methods and Comparative Studies. BMC Bioinformatics 2008, 9, 458.
  185. McAllister, S. R.; DiMaggio, P. A; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. Descriptor-Free Molecular Discovery in Large Libraries by Adaptive Substituent Reordering. Bioorganic and Medicinal Chemistry Letters 2008, 18 (22), 5967-5970.
  186. Yoon, S. G.; Park, S. B.; Park, S.; Lee, J.; Verderame, P. M.; Floudas, C. A. Synergy in Mergers of Petrochemical Companies within a Complex Considering Purchasing and Selling Advantage with Process Integration. Industrial & Engineering Chemistry Research 2008, 47 (15), 5556-5567.
  187. Taylor, M. S.; Fung, H. K.; Rajgaria, R.; Filizola, M.; Weinstein, H.; Floudas, C. A. Mutations Affecting the Oligomerization Interface of G-Protein Coupled Receptors Revealed by a Novel De Novo Protein Design Framework. Biophysical J. 2008, 94, 2470-2481.
  188. DiMaggio, P. A.; Floudas, C. A.; Lu, B.; Yates, J. R. A Hybrid Method for Peptide Identification using Integer Linear Optimization, Local Database Search, and QTOF or OrbiTrap Tandem Mass Spectrometry. J. Proteome Res. 2008, 7, 1584-1593.
  189. DiMaggio, P. A.; McAllister, S. R.; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. Optimal Methods for Re-ordering Data Matrices in Systems Biology and Drug Discovery Applications. Biophysical Reviews and Letters 2008, 3, 19-42.
  190. Tan, M. P.; Smith, E. R.; Broach, J. R.; Floudas, C. A. Microarray Data Mining: A Novel Optimization-Based Approach to Uncover Biologically Coherent Structures. BMC Bioinformatics 2008, 9, 268-283.
  191. Verderame, P. M.; Floudas, C. A. Integrated Operational Planning and Medium-Term Scheduling of a Large-Scale Industrial Batch Plants. Industrial & Engineering Chemistry Research 2008, 47, 4845-4860.
  192. McAllister, S. R.; Floudas, C. A. Alpha-Helical Topology Prediction and Generation of Distance Restraints in Membrane Proteins. Biophysical Journal 2008, 95 (11), 5281-5295.
  193. Shaik, M. A.; Floudas, C. A.; Kallrath, J.; Pitz, H. J. Production Scheduling of a Large-Scale Industrial Continuous Plant: Short-Term and Medium-Term Scheduling. Computers and Chemical Engineering 2009, 33 (3), 670-686.
  194. McAllister, S. R.; DiMaggio, P. A.; Floudas, C. A. Mathematical Modeling and Efficient Optimization Methods for the Distance-Dependent Rearrangement Clustering Problem. J. of Global Optimization 2009, 45, 111-129.
  195. McAllister, S. R.; Floudas, C. A. Enhanced Bounding Techniques to Reduce the Protein Conformational Search Space. Optimization Methods and Software 2009, 24 (4-5), 837-855.
  196. Verderame, P. M.; Floudas, C. A. Operational Planning Framework for Multisite Production and Distribution Networks. Computers & Chemical Engineering 2009, 33 (5), 1036-1050.
  197. Floudas, C. A.; Gounaris, C. E. A Review of Recent Advances In Global Optimization. J. of Global Optimization 2009, 45, 3-38.
  198. Rajgaria, R.; McAllister, S. R.; Floudas, C. A. Towards Accurate Residue-Residue Contact Prediction for Alpha Helical Proteins via Integer Linear Optimization. Proteins 2009, 74 (4), 929-947.
  199. Shaik, M. A.; Floudas, C. A. Novel Unified Modeling Approach for Short-term Scheduling. Industrial & Engineering Chemistry Research 2009, 48, 2947-2964.
  200. Misener, R.; Gounaris, C. E.; Floudas, C. A. Global Optimization of Gas Lifting Operations: A Comparative Study of Piecewise Linear Formulations. Industrial & Engineering Chemistry Research 2009, 48 (13), 6098-6104.
  201. Yoon, S. G.; Park, S.; Lee, J.; Floudas, C. A.; Verderame, P. Selecting the optimal target company based on synergy calculation for the vertical merger in a petrochemical complex. Industrial & Engineering Chemistry Research 2009, 48 (3), 1511-1521.
  202. Gounaris, C. E.; Misener, R.; Floudas, C. A. Computational comparison of piecewise-linear relaxations for pooling problems. Industrial & Engineering Chemistry Research 2009, 48 (12), 5742-5766.
  203. Verderame, P. M.; Floudas, C. A. Operational planning of large scale industrial batch plants under demand due date and amount uncertainty: I. Robust optimization framework. Industrial & Engineering Chemistry Research 2009, 48 (15), 7214-7231.
  204. Ranjan, R.; Thust, S.; Gounaris, C. E.; Woo, M.; Floudas, C. A.; Keitz, M. V.; Valentas, K. J.; Wei, J.; Tsapatsis, M. Adsorption of fermentation inhibitors from lignocellulosic biomass hydrolyzates for improved ethanol yield and value-added product recovery. Microporous Mesoporous Materials 2009, 122 (1-3), 143-148.
  205. Young, N. L.; DiMaggio, P. A.; Plazas-Mayorca, M. D.; Baliban, R. C.; Floudas, C. A.; Garcia, B. A. High-throughput characterization of combinatorial histone codes. Molecular & Cellular Proteomics 2009, 8 (10), 2266-2284.
  206. Wei, J.; Floudas, C. A.; Gounaris, C. E. Search engines for shape selectivity. Catalysis Letters 2009, 133 (1-2), 234-241.
  207. DiMaggio, P. A.; Young, N. L.; Baliban, R. C.; Garcia, B. A.; Floudas, C. A. A mixed integer linear optimization framework for the identification and quantification of targeted post-translational modifications of highly modified proteins using multiplexed electron transfer dissociation tandem mass spectrometry. Molecular & Cellular Proteomics 2009, 8 (11), 2527-2543.
  208. Misener, R.; Floudas, C. A. Advances for the pooling problem: Modeling, global optimization and computational studies. Appl. Comput. Math. 2009, 8, 3-22.
  209. Subramani, A.; DiMaggio, P. A.; Floudas, C. A. Selecting high quality protein structures from diverse conformational ensembles. Biophysical J. 2009, 97, 1728-1736.
  210. Sun, J.; Abdeljabbar, D. M.; Clarke, N.; Bellows, M. L.; Floudas, C. A.; Link, A. J. Reconstitution and Engineering of Apoptotic Protein Interactions on the Bacterial Cell Surface. J. Molecular Biology 2009, 394, 297-305.
  211. Yoon, S. G.; Park, S.; Lee, J.; Verderame, P.; Floudas, C. A. Evaluation of synergy effect in the horizontal merger of companies in a petrochemical complex. Industrial & Engineering Chemistry Research 2009, 48 (24), 11017-11033.
  212. Birgin, E. G.; Floudas, C. A.; Martinez, J. M. Global Minimization using an Augmented Lagrangian Method with Variable Lower-Level Constraints. Mathematical Programming, Ser. A 2010, 125, 139-162.
  213. DiMaggio, P. A.; McAllister, S. R.; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. A network flow model for biclustering via optimal re-ordering of data matrices. J. of Global Optimization 2010, 47 (3), 343-354.
  214. McAllister, S. R.; Floudas, C. A. An Improved Hybrid Global Optimization Method for Protein Tertiary Structure Prediction. Computational Optimization and Applications 2010, 45, 377-413.
  215. Bellows, M. L.; Fung, H. K.; Taylor, M. S.; Floudas, C. A.; Lopez de Victoria, A.; Morikis, D. New Compstatin Variants Through Two De Novo Protein Design Frameworks. Biophysical Journal 2010, 98 (10), 2337-2346.
  216. Lu, H.-C.; Li, H.-L.; Gounaris, C. E.; Floudas, C. A. Convex Relaxation for Solving Posynomial Programs. Journal of Global Optimization 2010, 46, 147-154.
  217. DiMaggio, P. A.; McAllister, S. R.; Floudas, C. A.; Feng, X. J.; Rabinowitz, J. D.; Rabitz, H. A. Enhancing Molecular Discovery Using Descriptor-Free Rearrangement Clustering Techniques for Sparse Data Sets. AIChE J. 2010, 56 (2), 405-418.
  218. Baliban, R. C.; DiMaggio, P. A.; Young, N. L.; Plazas-Mayorca, M. D.; Garcia, B. A.; Floudas, C. A. A novel approach for untargeted post-translational modification identification using integer linear optimization and tandem mass spectrometry. Molecular and Cellular Proteomics 2010, 9 (5), 764-779.
  219. Gounaris, C. E.; Wei, J.; Floudas, C. A. Rational design of shape selective separations and catalysis: Lattice relaxation, locally optimal conformations and effective aperture size. AIChE J. 2010, 56 (3), 611-632.
  220. Rajgaria, R.; Wei, Y.; Floudas, C. A. Contact prediction for beta and alpha-beta proteins using integer linear optimization and its impact on the first principles 3d structure prediction method ASTRO-FOLD. Proteins 2010, 78, 1825-1846.
  221. Misener, R.; Floudas, C. A. Piecewise-linear approximations of multidimensional functions. Journal of Optimization Theory and its Applications 2010, 145, 120-147.
  222. Verderame, P. M.; Floudas, C. A. Operational planning of large scale industrial batch plants under demand due date and amount uncertainty: II. Conditional value at risk framework. Industrial & Engineering Chemistry Research 2010, 49 (1), 260-275.
  223. Misener, R.; Gounaris, C. E.; Floudas, C. A. Mathematical modeling and global optimization of large scale extended pooling problems with the EPA complex emissions contraints. Computers and Chemical Engineering 2010, 34, 1432-1456.
  224. Li, J.; Susarla, N.; Karimi, I. A.; Shaik, M. A.; Floudas, C. A. An analysis of some unit-specific event-based models for the short term scheduling of non-continuous processes. Industrial & Engineering Chemistry Research 2010, 49, 633-647.
  225. Bellows, M. L.; Floudas, C. A. Computational methods for de novo protein design and its applications to the human immunodeficiency virus 1, purine nucleoside phosphorylase, ubiquitin specific protease 7 and histone demethylases. Current Drug Targets 2010, 11 (3), 264-278.
  226. Li, J.; Floudas, C. A. Optimal event point determination for short term scheduling of multipurpose batch plants via unit-specific event-based continuous-time approaches. Industrial & Engineering Chemistry Research 2010, 49, 7446-7469.
  227. Verderame, P. M.; Floudas, C. A. Integration of operational planning and medium-term scheduling for large-scale industrial batch plants under demand and processing time uncertainty. Industrial & Engineering Chemistry Research 2010, 49, 4948-4965.
  228. Verderame, P. M.; Elia, J. A.; Li, J.; Floudas, C. A. Planning and scheduling under uncertainty: A review across multiple sectors. Industrial & Engineering Chemistry Research 2010, 49, 3993-4017.
  229. Misener, R.; Floudas, C. A. Global optimization of large-scale generalized pooling problems: Quadratically constrained MINLP models. Industrial & Engineering Chemistry Research 2010, 49, 5424-5438.
  230. Young, N. L.; Plazas-Mayorca, M. D.; DiMaggio, P. A.; Flaniken, I. Z.; J., B. A; Mishra, N.; LeRoy, G.; Floudas, C. A.; Garcia, B. A. Collective mass spectrometry approaches reveal broad and combinatorial modification of high mobility group protein A1a. J. American Society for Mass Spectrometry 2010, 21, 960-970.
  231. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Toward novel hybrid biomass, coal, and natural gas processes for satisfying current transportation fuel demands, 1: Process alternatives, gasification modeling, process simulation, and economic analysis. Industrial & Engineering Chemistry Research 2010, 49, 7343-7370.
  232. Elia, J. A.; Baliban, R, C.; Floudas, C. A. Toward novel hybrid biomass, coal, and natural gas processes for satisfying current transportation fuel demands, 2: Simultaneous heat and power integration. Industrial & Engineering Chemistry Research 2010, 49, 7371-7388.
  233. Tamamis, P.; Morikis, D.; Floudas, C. A.; Archontis, G. Species specificity of the complement inhibitor compstatin investigated by all-atom molecular dynamics simulations. Proteins 2010, 78 (12), 2655-2667.
  234. DiMaggio, P. A.; Subramani, A.; Judson, R. S.; Floudas, C. A. A novel framework for predicting in vivo toxicities from in vitro data using optimal methods for dense and sparse matrix clustering and logistic regression. Toxicological Sciences 2010, 118 (1), 251-265.
  235. Verderame, P.; Floudas, C. A. Multisite planning under demand and transportation time uncertainty: Robust optimization and conditional value at risk frameworks. Industrial & Engineering Chemistry Research 2010, 50 (9), 4959-4982.
  236. Bellows, M. L.; Taylor, M. S.; Cole, P. A.; Shen, L.; Siliciano, R. F.; Fung, H. K.; Floudas, C. A. Discovery of entry inhibitors for HIV-1 via a novel de novo protein design framework. Biophysical J. 2010, 99, 3445-3453.
  237. Pan, S. J.; Cheung, W. L.; Fung, H. K.; Floudas, C. A.; Link, A. J. Computational design of the lasso peptide antibiotic microcin J25. Protein Engineering, Design & Selection 2011, 24, 275-282.
  238. Elia, J. A.; Baliban, R. C.; Xiao, X.; Floudas, C. A. Optimal energy supply network determination and life cycle analysis for hybrid coal, biomass and natural gas to liquid (CBGTL) plants using carbon-based hydrogen production. Computers and Chemical Engineering 2011, 35, 1399-1430.
  239. Wei, Y.; Floudas, C. A. Enhanced inter-helical residue contact prediction in transmembrane proteins. Chemical Engineering Science 2011, 66, 4356-4369.
  240. Lopez de Victoria, A.; Gorham Jr., R. D.; Bellows-Peterson, M. L.; Ling, J.; D., Lo D; Floudas, C. A.; Morikis, D. A new generation of potent complement inhibitors of the compstatin family. Chemical Biology and Drug Design 2011, 77, 431-440.
  241. Misener, R.; Thompson, J. P.; Floudas, C. A. APOGEE: Global Optimization of Standard, Generalized, and Extended Pooling Problems via Linear and Logarithmic Partitioning Schemes. Comput. Chem. Eng. 2011, 35, 876-892.
  242. Gounaris, C. E.; Rajendran, K.; Kevrekidis, I. G. ,; Floudas, C. A. Generation of Networks with Prescribed Degree-Dependent Clustering. Optim. Lett. 2011, 5, 435-451.
  243. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Optimization framework for the simultaneous process synthesis, heat and power integration of a thermochemical hybrid biomass, coal, and natural gas facility. Computers and Chemical Engineering 2011, 35, 1647-1690.
  244. Khoury, G. A.; Baliban, R. C.; Floudas, C. A. Proteome-wide post-translational modification statistics: frequency analysis and curation of the swiss-prot database. Scientific Reports 2011, 1 (90), 1-5.
  245. First, E. L.; Gounaris, C. E.; Wei, J.; Floudas, C. A. Computational characterization of zeolite porous networks: an automated approach. Physical Chemistry Chemical Physics 2011, 13, 17339-17358.
  246. Li, Z.; Ding, R.; Floudas, C. A. A Comparative Theoretical and Computational Study on Robust Counterpart Optimization: I. Robust Linear Optimization and Robust Mixed Integer Linear Optimization. Industrial & Engineering Chemistry Research 2011, 50, 10567-10603.
  247. Torrente, M. P.; Zee, B. M.; Young, N. L.; Baliban, R. C.; LeRoy, G.; Floudas, C. A.; Hake, S. B.; Garcia, B. A. Proteomic Interrogation of Human Chromatin. PLoS ONE 2011, 6 (9), e24747.
  248. Tamamis, P.; Pierou, P.; Mytidou, C.; Floudas, C. A.; Morikis, D.; Archontis, G. Design of a modified mouse protein with ligand binding properties of its human analog by molecular dynamics simulations: The case of C3 inhibition by compstatin. Proteins: Structure, Function, and Bioinformatics 2011, 79 (11), 3166-3179.
  249. First, E. L.; Gounaris, C. E.; Floudas, C. A. Stereochemically Consistent Reaction Mapping and Identification of Multiple Reaction Mechanisms through Integer Linear Optimization. Journal of Chemical Information and Modeling 2012, 52 (1), 84-92.
  250. Li, J.; Misener, R.; Floudas, C. A. Continuous-time modeling and global optimization approach for scheduling of crude oil operations. AIChE Journal 2012, 58 (1), 205-226.
  251. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Simultaneous process synthesis, heat, power, and water integration of thermochemical hybrid biomass, coal, and natural gas facilities. Computers & Chemical Engineering 2012, 37, 297-327.
  252. Baliban, R. C.; Sakellari, D.; Li, Z.; DiMaggio, P. A.; Garcia, B. A.; Floudas, C. A. Novel protein identification methods for biomarker discovery via a proteomic analysis of periodontally healthy and diseased gingival crevicular fluid samples. Journal of Clinical Periodontology 2012, 39 (3), 203-212.
  253. Wei, Y.; Thompson, J.; Floudas, C. A. CONCORD: a consensus method for protein secondary structure prediction via mixed integer linear optimization. Proceedings of the Royal Society A: Mathematical, Physical and Engineering Science 2012, 468 (2139), 831-850.
  254. Subramani, A.; Floudas, C. A. β-sheet Topology Prediction with High Precision and Recall for β and Mixed α/β Proteins. PLoS ONE 2012, 7 (3), e32461.
  255. Floudas, C. A.; Elia, J. A.; Baliban, R. C. Hybrid and single feedstock energy processes for liquid transportation fuels: A critical review. Computers & Chemical Engineering 2012, 41 (6), 24-51.
  256. Tang, Q.; Li, J.; Floudas, C. A.; Deng, M.; Yan, Y.; Xi, Z.; Chen, P.; Kong, J. Optimization framework for process scheduling of operation-dependent automobile assembly lines. Optimization Letters 2012, 6 (4), 797-824.
  257. Tamamis, P.; López de Victoria, A.; Gorham, R. D.; Bellows-Peterson, M. L.; Pierou, P.; Floudas, C. A.; Morikis, D.; Archontis, G. Molecular Dynamics in Drug Design: New Generations of Compstatin Analogs. Chemical Biology & Drug Design 2012, 79 (5), 703-718.
  258. Subramani, A.; Wei, Y.; Floudas, C. A. ASTRO-FOLD 2.0: An enhanced framework for protein structure prediction. AIChE Journal 2012, 58 (5), 1619-1637.
  259. Li, J.; Verderame, P. M.; Floudas, C. A. Operational Planning of Large-Scale Continuous Processes: Deterministic Planning Model and Robust Optimization for Demand Amount and Due Date Uncertainty. Industrial & Engineering Chemistry Research 2012, 51 (11), 4347-4362.
  260. Bellows-Peterson, M. L.; Fung, Ho Ki; Floudas, C. A.; Kieslich, C. A.; Zhang, Li; Morikis, D.; Wareham, K. J.; Monk, P. N.; Hawksworth, O. A.; Woodruff, T. M. De Novo Peptide Design with C3a Receptor Agonist and Antagonist Activities: Theoretical Predictions and Experimental Validation. Journal of Medicinal Chemistry 2012, 55 (9), 4159-4168.
  261. Li, Z.; Tang, Q.; Floudas, C. A. A Comparative Theoretical and Computational Study on Robust Counterpart Optimization: II. Probabilistic Guarantees on Constraint Satisfaction. Industrial & Engineering Chemistry Research 2012, 51 (19), 6769-6788.
  262. Elia, J. A.; Baliban, R. C.; Floudas, C. A. Nationwide energy supply chain analysis for hybrid feedstock processes with significant CO2 emissions reduction. AIChE Journal 2012, 58 (7), 2142-2154.
  263. Baliban, R. C; Elia, J. A; Misener, R.; Floudas, C. A Global optimization of a MINLP process synthesis model for thermochemical based conversion of hybrid coal, biomass, and natural gas to liquid fuels. Computers & Chemical Engineering 2012, 42, 64-86.
  264. Li, J.; Xiao, X.; Tang, Q.; Floudas, C. A. Production Scheduling of a Large-Scale Steelmaking Continuous Casting Process via Unit-Specific Event-Based Continuous-Time Models: Short-Term and Medium-Term Scheduling. Industrial & Engineering Chemistry Research 2012, 51 (21), 7300-7319.
  265. Subramani, A.; Floudas, C. A. Structure Prediction of Loops with Fixed and Flexible Stems. The Journal of Physical Chemistry B 2012, 116 (23), 6670-6682.
  266. Skjäl, A.; Westerlund, T.; Misener, R.; Floudas, C. A. A Generalization of the Classical αBB Convex Underestimation via Diagonal and Nondiagonal Quadratic Terms. Journal of Optimization Theory and Applications 2012, 154 (2), 462-490.
  267. Li, J.; Misener, R.; Floudas, C. A. Scheduling of crude oil operations under demand uncertainty: A robust optimization framework coupled with global optimization. AIChE Journal 2012, 58 (8), 2373-2396.
  268. Baliban, R. C.; DiMaggio, P. A.; Plazas-Mayorca, M. D.; Garcia, B. A.; Floudas, C. A. PILOT_PROTEIN: Identification of Unmodified and Modified Proteins via High-Resolution Mass Spectrometry and Mixed-Integer Linear Optimization. Journal of Proteome Research 2012, 11 (9), 4615-4629.
  269. Misener, R.; Floudas, C. A. Global optimization of mixed-integer models with quadratic and signomial functions: a review. Applied and Computational Mathematics 2012, 11, 317-336.
  270. Baliban, R. C.; Elia, J. A.; Weekman, V.; Floudas, C. A. Process synthesis of hybrid coal, biomass, and natural gas to liquids via Fischer–Tropsch synthesis, ZSM-5 catalytic conversion, methanol synthesis, methanol-to-gasoline, and methanol-to-olefins/distillate technologies. Computers & Chemical Engineering 2012, 47 (12), 29-56.
  271. Misener, R.; Floudas, C. A. Global optimization of mixed-integer quadratically-constrained quadratic programs (MIQCQP) through piecewise-linear and edge-concave relaxations. Mathematical Programming 2012, 136, 155-182.
  272. Hasan, M. M. F.; Baliban, R. C.; Elia, J. A.; Floudas, C. A. Modeling, Simulation, and Optimization of Postcombustion CO2 Capture for Variable Feed Concentration and Flow Rate. 1. Chemical Absorption and Membrane Processes. Industrial & Engineering Chemistry Research 2012, 51 (48), 15642-15664.
  273. Hasan, M. M. F.; Baliban, R. C.; Elia, J. A.; Floudas, C. A. Modeling, Simulation, and Optimization of Postcombustion CO2 Capture for Variable Feed Concentration and Flow Rate. 2. Pressure Swing Adsorption and Vacuum Swing Adsorption Processes. Industrial & Engineering Chemistry Research 2012, 51 (48), 15665-15682.
  274. First, E. L.; Floudas, C. A. MOFomics: Computational pore characterization of metal–organic frameworks. Microporous and Mesoporous Materials 2013, 165, 32-39.
  275. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Biomass to liquid transportation fuels (BTL) systems: process synthesis and global optimization framework. Energy Environ. Sci. 2013, 6 (1), 267-287.
  276. Baliban, R. C.; Sakellari, D.; Li, Z.; Guzman, Y. A.; Garcia, B. A.; Floudas, C. A. Discovery of biomarker combinations that predict periodontal health or disease with high accuracy from GCF samples based on high-throughput proteomic analysis and mixed-integer linear optimization. Journal of Clinical Periodontology 2013, 40 (2), 131-139.
  277. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Novel Natural Gas to Liquids Processes: Process Synthesis and Global Optimization Strategies. AIChE Journal 2013, 59 (2), 505-531.
  278. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Biomass and Natural Gas to Liquid Transportation Fuels: Process Synthesis, Global Optimization, and Topology Analysis. Industrial & Engineering Chemistry Research 2013, 52 (9), 3381-3406.
  279. First, E. L.; Gounaris, C. E.; Floudas, C. A. Predictive Framework for Shape-Selective Separations in Three-Dimensional Zeolites and Metal–Organic Frameworks. Langmuir 2013, 29 (18), 5599-5608.
  280. Smadbeck, J.; Peterson, M. B.; Khoury, G. A.; Taylor, M. A.; Floudas, C. A. Protein WISDOM: a Workbench for In Silico De novo Design of BioMolecules. Journal of Visualized Experiments 2013, e50476, 1-25.
  281. Gounaris, C. E.; Wiesemann, W.; Floudas, C. A. The Robust Capacitated Vehicle Routing Problem Under Demand Uncertainty. Operations Research 2013, 61, 677-693.
  282. Baliban, R. C.; Elia, J. A.; Floudas, C. A.; Gurau, B.; Weingarten, M. B.; Klotz, S. D. Hardwood Biomass to Gasoline, Diesel, and Jet Fuel: 1. Process Synthesis and Global Optimization of a Thermochemical Refinery. Energy & Fuels 2013, 27 (8), 4302-4324.
  283. Elia, J. A.; Baliban, R. C.; Floudas, C. A.; Gurau, B.; Weingarten, M. B.; Klotz, S. D. Hardwood Biomass to Gasoline, Diesel, and Jet Fuel: 2. Supply Chain Optimization Framework for a Network of Thermochemical Refineries. Energy & Fuels 2013, 27 (8), 4325-4352.
  284. Baliban, R. C.; Elia, J. A.; Floudas, C. A.; Xiao, X.; Zhang, Z.; Li, J.; Cao, H.; Ma, J.; Qiao, Y.; Hu, X. Thermochemical Conversion of Duckweed Biomass to Gasoline, Diesel, and Jet Fuel: Process Synthesis and Global Optimization. Industrial & Engineering Chemistry Research 2013, 52 (33), 11436-11450.
  285. Misener, R.; Floudas, C. A. GloMIQO: Global mixed-integer quadratic optimizer. Journal of Global Optimization 2013, 57 (1), 3-50.
  286. Tamamis, P.; Floudas, C. A. Molecular Recognition of CXCR4 by a Dual Tropic HIV-1 gp120 V3 Loop. Biophysical Journal 2013, 105 (6), 1502-1514.
  287. Gorham Jr., R. D.; Forest, D. L; Tamamis, P.; Victoria, A. L. d; Kraszni, M.; Kieslich, C. A; Banna, C. D; Bellows-Peterson, M. L; Larive, C. K; Floudas, C. A; Archontis, G.; Johnson, L. V; Morikis, D. Novel compstatin family peptides inhibit complement activation by drusen-like deposits in human retinal pigmented epithelial cell cultures. Experimental Eye Research 2013, 116, 96-108.
  288. Hasan, M. M. F.; First, E. L.; Floudas, C. A. Cost-effective CO2 capture based on in silico screening of zeolites and process optimization. Phys. Chem. Chem. Phys. 2013, 15 (40), 17601-17618.
  289. Gounaris, C. E; First, E. L; Floudas, C. A Estimation of diffusion anisotropy in microporous crystalline materials and optimization of crystal orientation in membranes. The Journal of Chemical Physics 2013, 139 (12), 124703.
  290. Khoury, G. A.; Thompson, J. P.; Smadbeck, J.; Kieslich, C. A.; Floudas, C. A. Forcefield_PTM: Ab Initio Charge and AMBER Forcefield Parameters for Frequently Occurring Post-Translational Modifications. Journal of Chemical Theory and Computation 2013, 9 (12), 5653-5674.
  291. Khoury, G. A.; Smadbeck, J.; Kieslich, C. A.; Floudas, C. A. Protein folding and de novo protein design for biotechnological applications. Trends in Biotechnology 2014, 32 (2), 99-109.
  292. Smadbeck, J.; Peterson, M. B.; Zee, B. M.; Garapaty, S.; Mago, A.; Lee, C.; Giannis, A.; Trojer, P.; A., Garcia. B.; Floudas, C. A. De Novo Peptide Design and Experimental Validation of Histone Methyltransferase Inhibitors. PLoS ONE 2014, 9 (2), e90095.
  293. Guzman, Y. A; Sakellari, D.; Arsenakis, M.; Floudas, C. A Proteomics for the discovery of biomarkers and diagnosis of periodontitis: a critical review. Expert Review of Proteomics 2014, 11 (1), 31-41.
  294. Khoury, G. A.; Tamamis, P.; Pinnaduwage, N.; Smadbeck, J.; Kieslich, C. A.; Floudas, C. A. Princeton_TIGRESS: Protein geometry refinement using simulations and support vector machines. Proteins: Structure, Function, and Bioinformatics 2014, 82 (5), 794-814.
  295. First, E. L.; Hasan, M. M. F.; Floudas, C. A. Discovery of novel zeolites for natural gas purification through combined material screening and process optimization. AIChE Journal 2014, 60 (5), 1767-1785.
  296. Elia, J. A.; Baliban, R. C.; Floudas, C. A. Nationwide, Regional, and Statewide Energy Supply Chain Optimization for Natural Gas to Liquid Transportation Fuel (GTL) Systems. Industrial & Engineering Chemistry Research 2014, 53 (13), 5366-5397.
  297. Tamamis, P.; Floudas, C. A. Molecular Recognition of CCR5 by an HIV-1 gp120 V3 Loop. PLoS ONE 2014, 9 (4), e95767.
  298. Tamamis, P.; Floudas, C. A. Elucidating a Key Component of Cancer Metastasis: CXCL12 (SDF-1α) Binding to CXCR4. Journal of Chemical Information and Modeling 2014, 54 (4), 1174-1188.
  299. Hasan, M. M. F.; Boukouvala, F.; First, E. L.; Floudas, C. A. Nationwide, Regional, and Statewide CO2 Capture, Utilization, and Sequestration Supply Chain Network Optimization. Industrial & Engineering Chemistry Research 2014, 53 (18), 7489-7506.
  300. Elia, J. A.; Floudas, C. A. Energy Supply Chain Optimization of Hybrid Feedstock Processes: A Review. Annual Review of Chemical and Biomolecular Engineering 2014, 5 (1), 147-179.
  301. Ye, Y.; Li, J.; Li, Z.; Tang, Q.; Xiao, X.; Floudas, C. A. Robust optimization and stochastic programming approaches for medium-term production scheduling of a large-scale steelmaking continuous casting process under demand uncertainty. Computers & Chemical Engineering 2014, 66, 165-185.
  302. Misener, R.; Floudas, C. A. A Framework for Globally Optimizing Mixed-Integer Signomial Programs. Journal of Optimization Theory and Applications 2014, 161 (3), 905-932.
  303. Misener, R.; Floudas, ChristodoulosA. ANTIGONE: Algorithms for coNTinuous / Integer Global Optimization of Nonlinear Equations. Journal of Global Optimization 2014, 59 (2-3), 503-526.
  304. Tamamis, P.; Floudas, C. A Elucidating a Key Anti-HIV-1 and Cancer-Associated Axis: The Structure of CCL5 (Rantes) in Complex with CCR5. Scientific Reports 2014, 4 (5447), 1-9.
  305. Smadbeck, J.; Chan, K. H.; Khoury, G. A.; Xue, Bo; Robinson, R. C.; Hauser, C. A. E.; Floudas, C. A. De Novo Design and Experimental Characterization of Ultrashort Self-Associating Peptides. PLoS Comput Biol 2014, 10 (7), e1003718.
  306. Khoury, G. A.; Liwo, A.; Khatib, F.; Zhou, H.; Chopra, G.; Bacardit, J.; Bortot, L. O.; Faccioli, R. A.; Deng, X.; He, Yi; Krupa, P.; Li, J.; Mozolewska, M. A.; Sieradzan, A. K.; Smadbeck, J.; Wirecki, T.; Cooper, S.; Flatten, J.; Xu, K.; Baker, D.; Cheng, J.; Delbem, A. C. B.; Floudas, C. A.; Keasar, C.; Levitt, M.; Popović, Z.; Scheraga, H. A.; Skolnick, J.; Crivelli, S. N.; Players, F. WeFold: A coopetition for protein structure prediction. Proteins: Structure, Function, and Bioinformatics 2014, 82 (9), 1850-1868.
  307. Li, Z.; Floudas, C. A. A Comparative Theoretical and Computational Study on Robust Counterpart Optimization: III. Improving the Quality of Robust Solutions. Industrial & Engineering Chemistry Research 2014, 53 (33), 13112-13124.
  308. Li, Z.; Floudas, C. A. Optimal scenario reduction framework based on distance of uncertainty distribution and output performance: I. Single reduction via mixed integer linear optimization. Computers & Chemical Engineering 2014, 70 (0), 50-66.
  309. Niziolek, A. M; Onel, O.; Elia, J. A.; Baliban, R. C.; Xiao, X.; Floudas, C. A Coal and Biomass to Liquid Transportation Fuels: Process Synthesis and Global Optimization Strategies. Industrial & Engineering Chemistry Research 2014, 53 (44), 17002-17025.
  310. Onel, O.; Niziolek, A. M.; Hasan, M. M. F.; Floudas, C. A. Municipal solid waste to liquid transportation fuels - Part I: Mathematical modeling of a municipal solid waste gasifier. Computers & Chemical Engineering 2014, 71 (0), 636-647.
  311. Khoury, G. A; Bhatia, N.; Floudas, C. A Hydration free energies calculated using the AMBER ff03 charge model for natural and unnatural amino acids and multiple water models. Computers & Chemical Engineering 2014, 71 (0), 745-752.
  312. Khoury, G. A.; Smadbeck, J.; Tamamis, P.; Vandris, A. C.; Kieslich, C. A.; Floudas, C. A. Forcefield_NCAA: Ab Initio Charge Parameters to Aid in the Discovery and Design of Therapeutic Proteins and Peptides with Unnatural Amino Acids and Their Application to Complement Inhibitors of the Compstatin Family. ACS Synthetic Biology 2014, 3 (12), 855-869.
  313. Halai, R.; Bellows-Peterson, M. L; Branchett, W.; Smadbeck, J.; Kieslich, C. A; Croker, D. E; Cooper, M. A; Morikis, D.; Woodruff, T. M; Floudas, C. A; Monk, P. N Derivation of ligands for the complement C3a receptor from the C-terminus of C5a. European journal of pharmacology 2014, 745, 176-181.
  314. Elia, J. A; Li, Ji; Floudas, C. A Strategic planning optimization for natural gas to liquid transportation fuel (GTL) systems. Computers & Chemical Engineering 2015, 72 (0), 109-125.
  315. Misener, R.; Smadbeck, J. B.; Floudas, C. A. Dynamically generated cutting planes for mixed-integer quadratically constrained quadratic programs and their incorporation into GloMIQO 2. Optimization Methods and Software 2015, 30 (1), 215-249.
  316. Onel, O.; Niziolek, A. M.; Elia, J. A.; Baliban, R. C.; Floudas, C. A. Biomass and Natural Gas to Liquid Transportation Fuels and Olefins (BGTL+C2_C4): Process Synthesis and Global Optimization. Industrial & Engineering Chemistry Research 2015, 54 (1), 359-385.
  317. Niziolek, A. M; Onel, O.; Hasan, M. M. F.; Floudas, C. A Municipal solid waste to liquid transportation fuels - Part II: Process synthesis and global optimization strategies. Computers & Chemical Engineering 2015, 74 (0), 184-203.
  318. Niziolek, A. M.; Onel, O.; Elia, J. A.; Baliban, R. C.; Floudas, C. A. Coproduction of liquid transportation fuels and C6_C8 aromatics from biomass and natural gas. AIChE Journal 2015, 61 (3), 831-856.
  319. Gorham, R. D.; Forest, D. L.; Khoury, G. A.; Smadbeck, J.; Beecher, C. N.; Healy, E. D.; Tamamis, P.; Archontis, G.; Larive, C. K.; Floudas, C. A.; Radeke, M. J.; Johnson, L. V.; Morikis, D. New Compstatin Peptides Containing N-Terminal Extensions and Non-Natural Amino Acids Exhibit Potent Complement Inhibition and Improved Solubility Characteristics. Journal of Medicinal Chemistry 2015, 58 (2), 814-826.
  320. Hasan, M. M. F.; First, E. L.; Boukouvala, F.; Floudas, C. A. A multi-scale framework for CO2 capture, utilization, and sequestration: CCUS and CCU. Computers & Chemical Engineering 2015, 81, 2-21.
  321. Onel, O.; Niziolek, A. M.; Floudas, C. A. Integrated biomass and fossil fuel systems towards the production of fuels and chemicals: state of the art approaches and future challenges. Current Opinion in Chemical Engineering 2015, 9, 66-74.
  322. Tang, Q.; Li, Z.; Zhang, L.; Floudas, C. A.; Cao, X. Effective hybrid teaching-learning-based optimization algorithm for balancing two-sided assembly lines with multiple constraints. Chinese Journal of Mechanical Engineering 2015, 28 (5), 1067-1079.
  323. Guzman, Y. A; Matthews, L. R; Floudas, C. A New a priori and a posteriori probabilistic bounds for robust counterpart optimization: I. Unknown probability distributions. Computers & Chemical Engineering 2016, 84, 568-598.
  324. Li, Z.; Floudas, C. A Optimal scenario reduction framework based on distance of uncertainty distribution and output performance: II. Sequential reduction. Computers & Chemical Engineering 2016, 84, 599-610.
  325. Guzman, Y. A.; Hasan, M. M. F.; Floudas, C. A. Performance of convex underestimators in a branch-and-bound framework. Optimization Letters 2016, 10 (2), 283-308.
  326. Kieslich, C. A.; Tamamis, P.; Guzman, Y. A.; Onel, M.; Floudas, C. A. Highly Accurate Structure-Based Prediction of HIV-1 Coreceptor Usage Suggests Intermolecular Interactions Driving Tropism. PLoS ONE 2016, 11 (2), e0148974.
  327. Floudas, C. A.; Niziolek, A. M.; Onel, O.; Matthews, L. R. Multi-scale systems engineering for energy and the environment: Challenges and opportunities. AIChE Journal 2016, 62 (3), 602-623.
  328. Zhang, H.; Huang, Q.; Bei, Z.; Wei, Y.; Floudas, C. A. COMSAT: Residue contact prediction of transmembrane proteins based on support vector machines and mixed integer linear programming. Proteins: Structure, Function, and Bioinformatics 2016, 84 (3), 332-348.
  329. Boukouvala, F.; Misener, R.; Floudas, C. A Global optimization advances in Mixed-Integer Nonlinear Programming, MINLP, and Constrained Derivative-Free Optimization, CDFO. European Journal of Operational Research 2016, 252 (3), 701-727.
  330. Onel, O.; Niziolek, A. M; Floudas, C. A Optimal Production of Light Olefins from Natural Gas via the Methanol Intermediate. Industrial & Engineering Chemistry Research 2016, 55 (11), 3043-3063.
  331. Matthews, L. R; Niziolek, A. M; Onel, O.; Pinnaduwage, N.; Floudas, C. A Biomass to Liquid Transportation Fuels via Biological and Thermochemical Conversion: Process Synthesis and Global Optimization Strategies. Industrial & Engineering Chemistry Research 2016, 55 (12), 3203-3225.
  332. Tang, Q.; Liang, Y.; Zhang, L.; Floudas, C. A.; Cao, X. Balancing mixed-model assembly lines with sequence-dependent tasks via hybrid genetic algorithm. Journal of Global Optimization 2016, 65 (1), 83-107.
  333. Niziolek, A. M.; Onel, O.; Floudas, C. A. Production of benzene, toluene, and xylenes from natural gas via methanol: Process synthesis and global optimization. AIChE Journal 2016, 62 (5), 1531-1556.
  334. Li, J.; Xiao, X.; Floudas, C. A. Integrated gasoline blending and order delivery operations: Part I. short-term scheduling and global optimization for single and multi-period operations. AIChE Journal 2016, 62 (6), 2043-2070.
  335. Kieslich, C. A; Smadbeck, J.; Khoury, G. A; Floudas, C. A conSSert: Consensus SVM Model for Accurate Prediction of Ordered Secondary Structure. Journal of Chemical Information and Modeling 2016, 56 (3), 455-461.
  336. Liu, T.; First, E. L; Hasan, M. M. F.; Floudas, C. A A multi-scale approach for the discovery of zeolites for hydrogen sulfide removal. Computers & Chemical Engineering 2016, 91, 206-218.
  337. Niziolek, A. M; Onel, O.; Guzman, Y. A; Floudas, C. A Biomass-Based Production of Benzene, Toluene, and Xylenes via Methanol: Process Synthesis and Deterministic Global Optimization. Energy & Fuels 2016, 30 (6), 4970-4998.

Refereed Proceedings Publications

  1. Floudas, C. A.; Grossmann, I. E. A New Approach For Evaluating Flexibility In Chemical Process Design. Proceedings of Process Systems Engineering, PSE ‘85, Cambridge, England; 1985; pp 619-631.
  2. Floudas, C. A.; Grossmann, I. E.; Wood, R. Automatic Synthesis and Optimization of Heat Exchanger Networks. Proceedings of Chemical Engineering Conference, CHEMECA; 1986; Paper 5a.
  3. Floudas, C. A.; Grossmann, I. E. Synthesis of Flexible Heat Exchanger Networks. Proceedings of Chemical Engineering Fundamentals: The Use of Computers in Chemical Engineering, CEF ‘87; 1987; pp 711-717.
  4. Paules, G. E. IV; Floudas, C. A. Design of Multiperiod Distillation Sequences. Proceedings of the First International Conference on Foundations of Computer-Aided Process Operati, FOCAPO ‘87; Reklaitis, G. V., Spriggs, H. D., Eds.; Elsevier Science Ltd, 1987; pp 647-653.
  5. Georgiou, A.; Floudas, C. A. Determination of Generic Rank of Structural Matrices. Proceedings of the 22nd Conference on Information Sciences and Systems, Princeton University; 1988; pp 585-590.
  6. Ciric, A. R.; Floudas, C. A. Optimization Model for Retrofitting Heat Exchanger Networks. I.Ch.E. Symposium Series No. 109; 1988; pp 61-75.
  7. Floudas, C. A. Multicomponent Multi-feed Multi-product Synthesis of Distillation Sequences. I.Ch.E. Symposium Series No. 109; 1988; pp 137-159.
  8. Floudas, C. A.; Ciric, A. R. Global Optimum Issues on Heat Exchanger Network Synthesis. Proceedings of Process Systems Engineering, PSE ‘88; 1988; pp 104-110.
  9. Ciric, A. R.; Floudas, C. A. Retrofitting Heat Exchanger Networks: A Two-stage Approach. Design Theory 1988; Newsome, S. L., Spillers, W. R., Finger, S., Eds.; Springer-Verlag, 1989; pp 265-286.
  10. Floudas, C. A.; Aggarwal, A.; Ciric, A. R. Global Optimum Search In Non-convex Design Problems. Proceedings of the NSF Engineering Design Research Conference, UMASS, Amherst; 1989; pp 435-451.
  11. Georgiou, A.; Floudas, C. A. Simultaneous Process Synthesis and Control: Minimization of Disturbance Propagation In Heat Recovery Systems. In Foundations of Computer-Aided Process Design, Proceedings of the Third International Conference on Foundations of Computer-Aided Process Design, Snowmass Village, Colorado, July 10-14, 1989; Siirola, J. J., Grossmann, I. E., Stephanopoulos, G., Eds.; Elsevier, 1990; pp 435-450.
  12. Ciric, A. R.; Floudas, C. A. A MINLP Model For Retrofitting Heat Exchanger Networks. Proceedings of the NSF Design and Manufacturing Systems Conference, Arizona State University; 1990.
  13. Aggarwal, A.; Floudas, C. A. Optimal Synthesis of Nonsharp Separation Sequences. In Computer Applications in Chemical Engineering, Proceedings of the European Symposium on Computer Applications in Chemical Engineering, ComChem ‘90, The Hague, The Netherlands, May 7-9, 1990; Bussemaker, H. Th., Iedema, P. D., Eds.; Elsevier: Amsterdam, 1990; pp 243-248.
  14. Psarris, P.; Floudas, C. A. A General Framework for the Enhancement of Dynamic Operability in MIMO Systems with Time Delays. Proceedings of the 23rd Conference on Information Sciences and Systems, Princeton University; 1990.
  15. Visweswaran, V.; Floudas, C. A. A Global Optimization Algorithm (GOP) For Certain Classes of Nonconvex NLPs - III. New Properties For Improved Computational Performance. Proceedings of Process Systems Engineering, PSE ‘91; 1991; pp I.6.1-I.6.17.
  16. Psarris, P.; Floudas, C. A. Interaction of Process Design and Control: Dynamic Operability in Multivariable Time Delay Systems. Proceedings of Process Systems Engineering, PSE ‘91; 1991; pp II.8.1-II.8.17.
  17. Luyben, M. L.; Floudas, C. A. A Multi-objective Optimization Approach for the Interaction of Design and Control. Proceedings of the IFAC Meeting on Design and Control; 1992; pp 101-107.
  18. Visweswaran, V.; Floudas, C. A. Global Optimization of Problems with Polynomial Functions in One Variable. Recent Advances in Global Optimization; Princeton University Press, 1992; pp 165-200.
  19. Papalexandri, K. P.; Pistikopoulos, E. N.; Floudas, C. A. Synthesis of Mass Exchanger Networks for Waste Minimization: An MINLP Approach. Proceedings of ESCAPE-4; 1994; pp 351-358.
  20. McDonald, C. M.; Floudas, C. A. Global Optimization for the phase equilibrium problem using the NRTL equation. Proceedings of ESCAPE-4; 1994; pp 273-280.
  21. Luyben, M. L.; Floudas, C. A. Interaction between Design and Control in a Reactor Separator Recycle system. Proceedings of Process Systems Engineering, PSE ‘94; 1994; pp 893-898.
  22. Luyben, M. L.; Floudas, C. A. Interaction between Design and Control in Heat-Integrated Distillation Synthesis. Proceedings of IFAC, IPDC ‘94; 1994; pp 76-82.
  23. Barmish, B. R.; Floudas, C. A.; Hollot, C. V.; Tempo, R. A Global Linear Programming Solution to Some Open Robustness Problems Including Matrix Polytope Stability. Proceedings of the ACC ‘95 Conference; 1995.
  24. Floudas, C. A.; Grossmann, I. E. Algorithmic approaches to process synthesis: Logic and global optimization. Proceedings of the Fourth International Conference on Foundations of Computer-Aided Process Design, Snowmass, Colorado, July 10-14, 1994; 1995; pp 198-221.
  25. Floudas, C. A. Global Optimization In Design and Control of Chemical Process Systems. Proceedings of DYCOPS-5 on Dynamics and Control of Process Systems; 1998; pp 167-178.
  26. Schweiger, C. A.; Floudas, C. A. Process Synthesis, Design and Control: A Mixed Integer Optimal Control Framework. Proceedings of DYCOPS-5 on Dynamics and Control of Process Systems; 1998; pp 189-194.
  27. Floudas, C. A.; Pardalos, P. M. Recent Developments in Global Optimization and Their Relevance to Process Design. Proceedings of Foundations of Computer Aided Process Design, FOCAPD ‘99; Malone, M. F., Trainham, J. A., Eds.; 1999.
  28. Esposito, W. R.; Floudas, C. A. Global Optimization of Nonconvex Problems with Differential-Algebraic Constraints. Proceedings of the European Symposium on Computer Aided Process Engineering, ESCAPE-10; Pierucci, S., Ed.; Elsevier, 2000; pp 73-78.
  29. Lin, X.; Floudas, C. A. Design, Synthesis and Scheduling of Multipurpose Batch Plants via an Effective Continuous-time Formulation. Proceedings of the European Symposium on Computer Aided Process Engineering, ESCAPE-10; Pierucci, S., Ed.; Elsevier, 2000; pp 1159-1164.
  30. Gümüş, Z. H.; Floudas, C. A. Nonlinear Bilevel Programming: A Deterministic Global Optimization Framework. Proceedings of the European Symposium on Computer Aided Process Engineering, ESCAPE-11; Elsevier, 2001.
  31. Klepeis, J. L.; Floudas, C. A. ASTRO-FOLD: Ab Initio Secondary and Tertiary Structure Prediction in Protein Folding. Proceedings of the European Symposium on Computer Aided Process Engineering, ESCAPE-12; Elsevier, 2002.
  32. Schafroth, H. D.; Monos, D.; Constantinescou, A.; Floudas, C. A. Predicting Peptide Binding to HLA Class II Molecules via Atomistic Level Modeling, Solvation Methods, and Deterministic Global Optimization. In HLA 2002: Immunobiology of the Human MHC, Proceedings of the 13th International Histocompatibility Workshop and Conference, Seattle, WA, May 12-22, 2002; Hansen, J. A., Ed.; IHWC Press, 2002.
  33. Floudas, C. A. Systems Approaches in Bioinformatics and Computational Genomics. In Information and Communications: Challenges for the Chemical Sciences in the 21st Century, Proceedings of the Workshop on Information and Communications, Washington, D.C., Oct 31-Nov 2, 2002; National Research Council, National Academies Press: Washington, D.C., 2003; pp 116-125.
  34. Lin, X.; Chajakis, E. D.; Floudas, C. A. Continuous-Time Scheduling of Tanker Lightering in Crude Oil Supply Chain. Proceedings of Process Systems Engineering, PSE ‘03; 2004; pp 547-553.
  35. Floudas, C. A.; Klepeis, J. L.; Lambris, J. D.; Morikis, D. De novo protein design: An interplay of global optimization, mixed-integer optimization, and experiments. Proceedings of FOCAPD ‘2004; Floudas, C. A., Agrawal, A., Eds.; 2004; pp 133-146.
  36. Floudas, C. A.; Akrotirianakis, I. G.; Caratzoulas, S.; Meyer, C. A.; Kallrath, J. Global Optimization in the 21st Century. Proceedings of the European Symposium on Computer-Aided Process Engineering, ESCAPE-14; Barbosa-Povoa, A., Matos, A., Eds.; Elsevier B.V., 2004; pp 23-51.
  37. McAllister, S. R.; Floudas, C. A. Alpha Helical Topology and Tertiary Structure Prediction in Globular Proteins. Proceedings of the 46th IEEE Conference on Decision and Control; 2007; pp 4551-4556.
  38. Tan, M. P.; Broach, J. R.; Floudas, C. A. A Novel Clustering Approach: Global Optimum Search with Enhanced Positioning. Proceedings of the 17th European Symposium on Computer Aided Process Engineering - ESCAPE17; Pleşu, V., Agachi, P. S., Eds.; Elsevier B.V., 2007;, Computer Aided Chemical Engineering pp 983-988.
  39. Misener, R.; Gounaris, C. E.; Floudas, C. A. Advances in global optimization for standard, generalized, and extended pooling problems with the EPA complex emissions model constraints. In Design for Energy and the Environment, Proceedings of FOCAPD ‘09; Halwagi, M. M., Linninger, A. A., Eds.; 2009; pp 1053-1071.
  40. Baliban, R. C.; Elia, J. A.; Floudas, C. A. Towards novel hybrid biomass and coal processes for satisfying transportation fuel demands. Proceedings of the 2nd Annual Gas Processing Symposium, 2010; Eljack, F. T., Reklaitis, G. V., El-Halwagi, M. M., Eds.; Elsevier, 2010.
  41. Misener, R.; Gounaris, C. E.; Floudas, C. A. Global optimization and parametric analysis of large-scale extended pooling problems. Proceedings of the 20th European Symposium on Computer Aided Process Engineering - ESCAPE20; Pierucci, S., Buzzi Ferraris, G., Eds.; Elsevier B.V., 2010.
  42. Gounaris, C. E.; Repoussis, P. P. ,; Tarantilis, C. D. ,; Floudas, C. A. A hybrid branch-and-cut approach for the capacitated vehicle routing problem. Proceedings of 21th European Symposium on Computer Aided Process Engineering-ESCAPE-21; Pistikopoulos, E. N. ,, Georgiadis, M. C. ,, Kokossis, A. C., Eds.; 2011; pp 507-511.
  43. Baliban, R. C. ,; Elia, J. A. ,; Floudas, C. A. Process synthesis with heat and power integration of thermochemical coal, biomass, and natural gas hybrid energy processes. Proceedings of 21th European Symposium on Computer Aided Process Engineering-ESCAPE-21; Pistikopoulos, E. N. ,, Georgiadis, M. C. ,, Kokossis, A. C., Eds.; 2011; pp 507-511.

Patents

  1. Adaptive Feedback Control Flow Reactor. U.S. Patent #6,153,149.
  2. Methods of Ab Initio Prediction of Alpha Helices, Beta Sheets, and Polypeptide Tertiary Structures. U.S. Patent #6,832,162.
  3. Glo-Star. U.S. Patent #60/100,744.
  4. High Finesse Control of Polymerization Processes. U.S. Patent #60/177,793.
  5. Systems and Methods for Applying Energetic Ions for Sterilization. U.S. Patent #09/760,513.
  6. Compstatin Analogs Identified by Computer Modeling and Optimization. U.S. Patent #60/412,277.
  7. Compstatin Analogs Identified by Computer Modeling and Optimization. U.S. Patent #60/504,879.
  8. In Silico Protein Discover, In Silico Protdis. U.S. Patent #60/453,447.
  9. Method and System for In Silico Protein Discovery. U.S. Patent #10/795,292.
  10. A Novel and Effective Integer Optimization Approach for the NSF Panel Assignment Problem: A Mutli-Resource and Preference-Constrained Generalized Assignment Problem. U.S. Patent # 60/453,447.
  11. System and Method for Optimally Assigning Groups of Individuals to Tasks. U.S. Patent #11/520,395.
  12. Computational Search Engine for Discovery of Shape Selective Materials. U.S. Patent #60/872,660.
  13. Compstatin Variants through Novel De Novo Protein Design Frameworks Applied to a Complex with Complement Component C3c. U.S. Patent #61/270,360.
  14. Compstatin Variants through Novel De Novo Protein Design Frameworks Applied to a Complex with Complement Component C3c. U.S. Patent #61/518,361.
  15. New Compstatin Variants through Novel De Novo Protein Design Frameworks Applied to a Complex with Complement Component C3c. U.S. Patent #61/135,159.
  16. New Compstatin Variants through Novel De Novo Protein Design Frameworks Applied to a Complex with Complement Component C3c. U.S. Patent #61/137,399.
  17. New Compstatin Variants through Novel De Novo Protein Design Frameworks Applied to a Complex with Complement Component C3c. U.S. Patent #61/395,834.
  18. Novel Inhibitors for HIV-1 gp41. U.S. Patent #61/211,276.
  19. Novel Inhibitors for HIV-1 gp41. U.S. Patent #61/340,432.
  20. C3aR Antagonists. U.S. Patent #61/273,071.
  21. Molecular Dynamics in Drug Design: New Generations of Compstatin Analogs. U.S. Patent #61/585,146.
  22. Molecular Dynamics in Drug Design: New Generations of Compstatin Analogs. U.S. Patent #61/739,438.
  23. Processes for Producing Synthetic Hydrocarbons from Coal, Biomass, and Natural Gas. U.S. Patent #PTC/US2013/028730.
  24. Processes for Producing Synthetic Liquid Hydrocarbons from Coal, Biomass, and Natural Gas. U.S. Patent #14/377,759.
  25. Processes for Producing Synthetic Liquid Hydrocarbons from Coal, Biomass, and Natural Gas. U.S. Patent #61/605,547.
  26. Novel C3aR Agonists and Antagonists. U.S. Patent #61/365,008.
  27. Novel C3aR Agonists and Antagonists. U.S. Patent #61/777,221.
  28. Diagnosis of Periodontal Stauts Using Protein Biomarkers within Gingival Crevicular Fluid. U.S. Patent #61/651,281.
  29. Diagnosis of Periodontal Stauts Using Protein Biomarkers within Gingival Crevicular Fluid. U.S. Patent #61/824,785.
  30. Processes for the Conversion of Natural Gas to Synthetic Hydrocarbons. U.S. Patent #61/716,348.
  31. Method of Determining Chemical Reaction Mechanisms. U.S. Patent #61/714,270.
  32. Method for Identifying a Microporous Material. U.S. Patent #61/761,436.
  33. Method for Identifying a Microporous Material. U.S. Patent #61/765,284.
  34. Method for Identifying a Microporous Material. U.S. Patent #61/873,940.
  35. Computational Framework and Parameters for the Discovery of Therapeutic Proteins and Peptides with Post-Translational MOdifications and Non-Canonical Amino Acids. U.S. Patent #61/824,782.
  36. Computational Framework and Parameters for the Discovery of Therapeutic Proteins and Peptides with Post-Translational MOdifications and Non-Canonical Amino Acids. U.S. Patent #61/914,710.
  37. Computational Framework and Parameters for the Discovery of Therapeutic Proteins and Peptides with Post-Translational MOdifications and Non-Canonical Amino Acids. U.S. Patent #61/923,459.
  38. Zeolite Identification and Methods for Purifying Methane Sources. U.S. Patent #61/889,296.
  39. Zeolite Identification and Methods for Purifying Methane Sources. U.S. Patent #61/926,561.
  40. CO2 Capture, Utilization, and Sequestration (CCUS) Supply Chain Network Optimization. U.S. Patent #61/929,690.
  41. CO2 Capture, Utilization, and Sequestration (CCUS) Supply Chain Network Optimization. U.S. Patent #62/073,078.

Plenary/Keynote/Distinguished Lectures

  1. "Recent Advances in Global Optimization for Process Synthesis, Design and Control : Enclosure of All Solutions", Plenary Talk, ESCAPE-9, Budapest, Hungary, May 1999.
  2. "Recent Developments in Global Optimization and their Relevance to Process Design", FOCAPD'99, Plenary Talk, Breckenridge, July 1999.
  3. "Recent Advances in Deterministic Global Optimization", Plenary Talk, Symposium in honor of C. Caratheodory, Samos, Greece, June 2000.
  4. "Recent Advances in Global Optimization", Plenary Talk, Optimization with High Technology Applications, Hong Kong, October 2000.
  5. "Structure Prediction in Protein Folding", Invited Lecture, Roger W. Sargent 75th Birthday Symposium, Imperial College, November 2001.
  6. "Ab Initio Protein Structure Prediction", (Plenary Lecture), Molecular Geometry Optimization Conference, University of Coimbra, Portugal, July 2002.
  7. "Deterministic Global Optimization" (Plenary Lecture), 2nd McMaster Optimization Conference, MOPTA 02, August 2002.
  8. "Deterministic Global Optimization: Theoretical, Computational and Implementation Advances", (Plenary Lecture), Global Constrained Optimization and Constraint Satisfaction Conference, Cocos'02, Valbonne - Sophia Antipolis, France, October 2002.
  9. "Recent Advances In Deterministic Global Optimization: Is there Light in the Tunnel?", (Plenary Lecture), ASPEN World Conference, October 2002.
  10. "Protein Folding and De Novo Peptide Design: Sequence to Structure to Function", Professional Progress Award Lecture, Annual AIChE Meeting, Indianapolis, November 2002.
  11. "Structure Prediction in Protein Folding from First Principles", Plenary Talk, Annual AIChE meeting, San Francisco, November 2003.
  12. "Protein Folding and De Novo Peptide Design: Sequence to Structure to Function", Keynote Lecture, BIOMAT 2003-III, Brazilian Symposium of Mathematical and Computational Biology, Rio de Janeiro, Brazil, November 2003.
  13. "Summary and Review of Process Systems Engineering, PSE-2004", Keynote Talk, Kunming, China, January 2004.
  14. "Novel Continuous Time Formulations and Scheduling Under Uncertainty", Plenary Talk, Robust Optimization Conference, Air Force Base, Shalimar, Florida, April 2004.
  15. "Global Optimizatin in the 21st Centrury", Keynote Talk, European Symposium on Computer Aided Process Engineering, ESCAPE 14, Lisbon, Portugal, May 2004.
  16. "Advances in Protein Folding and De Novo Protein Design", Plenary Talk, High Performance Algorithms and Software for Nonlinear Optimization Conference, Ischia, Italy, June 2004.
  17. "De Novo Protein Design: An Interplay of Mixed-Integer Optimization, Global Optimization and Experiments", Plenary Talk, Foundations of Computer Aided Process Design, FOCAPD-2004, Princeton, July 2004.
  18. "Deterministic Global Optimization: Advances and Challenges", Plenary Talk, Optimization 2004, Lisbon, Portugal, July 2004.
  19. "Novel Continuous Time Formulations and Scheduling Under Uncertainty", Plenary Talk, Joint Netherlands-Germany OR Conference, Tilburg, Netherlands, September 2004.
  20. "Advances in Protein Folding and De Novo Protein Design", Plenary Talk, DOE Workshop, Portland, Oregon, September 2004.
  21. "De Novo Peptide and Protein Design", Plenary Talk, BIOMAT-IV, Ilheus, Brazil, November 2004.
  22. "Advances in Deterministic Global Optimization", Plenary Talk, International Conference on Computational Management Science, Gainesville, Florida, April 2005.
  23. "Global Optimization in the 21st Century: Advances and Challenges", Plenary Talk, International Conference on Control and Optimization with Industrial Applications, COIA-2005, Baku, Azerbaijan, May 2005.
  24. "Robust Optimization Framework for Scheduling under Uncertainty", Plenary Talk, Conference on Optimization under Uncertainties, COUCH-2005, Heidelberg, Germany, September 2005.
  25. "Structure Prediction of Alpha Helical Proteins", Keynote Lecture, BIOMAT V Conference, Petropolis, Brazil, December 2005.
  26. "Deterministic Global Optimization: Advances and Challenges", Plenary Lecture, International Conference on Discrete-Continuous Optimization and Optimal Control, TU Darmstadt, Germany, December 2005.
  27. "State of the Art in Global Optimization", Plenary Lecture, International Networking for Young Scientists, British Council, Vilnius, Lithuania, February 2006.
  28. "Systems-Based Approaches at the Frontiers of Chemical Engineering and Computational Biology: Advances and Challenges", Lecture for Computing In Chemical Engineering Award, Annual AIChE Meeting, San Francisco, November 2006. Annual AIChE Meeting, San Francisco, November 2006.
  29. "Overcoming the Key Challenges in De Novo Protein Design: Enhancing Computational Efficiency and Incorporating True Backbone Flexibility", Keynote Lecture, BIOMAT-2006, Manaus, Brazil, December 2006.
  30. "Deterministic Global Optimization: Advances in Improved Convex Underestimation Methods", Plenary Talk, Indo-US Conference on Advances In Computational Optimization and Analysis of Systems, IIT, Kanpur, India, February 2007.
  31. "Deterministic Global Optimization: Advances and Challenges", Plenary Talk, International Conference on Complementarity, Duality and Global Optimization in Science and Engineering, University of Florida, Gainesville, February 2007.
  32. "Advances and Challenges in De Novo Protein Design", Bayer Lectureship, Carnegie Mellon University, March 2007.
  33. "Advances in De Novo Protein Design", Plenary Lecture, Conference on "From Computational Biophysics to Systems Biology", CBSB07, Julich, Germany, May 2007.
  34. State of the Art in Short-Term, Medium-Term and Reactive Scheduling for Large-Scale Batch and Continuous Processes", Keynote Lecture, ESCAPE-17, Bucharest, Romania, May 2007.
  35. "Novel Framework for Short-Term and Medium-Term Scheduling of Large-Scale Industrial Continuous Plants", Keynote Lecture, PSE-Asia-2007, Xian, China, August 2007.
  36. "Optimal Methods for Re-ordering Data Matrices in Systems Biology and Drug Discovery Applications", Keynote Lecture, International Symposium on Mathematical and Computational Biology, BIOMAT-7, Buzios, Brazil, November 2007.
  37. "Overview of aBB-based Approaches in Deterministic Global Optimization", Plenary Lecture, Global Optimization Workshop, Imperial College, December 2007.
  38. "Advances and Challenges in Deterministic Global Optimization", Plenary Lecture, International Conference on Nonconvex Programming, NCP07, Rouen, France, December 2007.
  39. "De Novo Protein Design", George T. Piercy Lecture, Department of Chemical Engineering and Materials Science, University of Minnesota, April 2008.
  40. "Novel Continuous-Time Formulations and Algorithms for Scheduling of Batch Manufacturing Processes", Plenary Lecture, APMOD2008, International Conference on Applied Mathematical Programming and Modeling, Bratislava, Slovakia, May 2008.
  41. "Advances In De Novo Protein Design", Keynote Lecture, COIA-2008, International Conference on Control and Optimization with Industrial Applications, Baku, Azerbaijan, June 2008.
  42. "Recent Advances In Deterministic Global Optimization", Plenary Lecture, Advanced Optimization Methods and Algorithms for the Design of Electronic Circuits and Devices, MOMiNE, Ragusa, Italy, June 2008.
  43. "Deterministic Global Optimization", Plenary Lecture, CLAIO-2008, XIV Latin Ibero American Congress on Operations Research, Cartagena, Colombia, September 2008.
  44. "Integrated operational planning and medium term scheduling of batch plants", Plenary Lecture, German Operations Research Workshop, Bad Honnef, Germany, November 2008.
  45. "Discovery though systems engineering thinking", Fifteenth Professor Roger W.H. Sargent Lecture, Imperial College, December 2008.
  46. "Deterministic Global Optimization: Advances in Theory and Applications", Plenary Lecture, Veszprem Optimization Conference: Advanced Algorithms, VOCAL-2008, Veszprem, Hungary, December 2008.
  47. "Deterministic Global Optimization: Advances and Challenges", Plenary Lecture, 1st World Congress on Global Optimization in Engineering & Sciences, WCGO-2009, June 2009.
  48. "Advances in global optimization for standard, generalized and extended pooling problems with the EPA complex emissions model constraints", Plenary Lecture, Foundations of Computer Aided Process Design, FOCAPD-2009, June 2009.
  49. "Towards hybrid biomass and coal processes for satisfying current transportation fuel demands", Plenary, CAST Session, Annual AIChE Meeting, Nashville, November 2009.
  50. "Towards Large Scale Deterministic Global Optimization", Plenary Talk, International Conference on Optimization, Simulation and Control, Ulaanbaatar, Mongolia, July 2010.
  51. "Deterministic Global Optimization: Theory, Methods and Large-Scale Applications", Parametric Optimization and Related Topics X, PARAOPT-X, Plenary Talk, Karlsruhe Institute of Technology, Karlsruhe, Germany, September 2010.
  52. "Biclustering Methods for Re-ordering Data Matrices in Systems Biology, Drug Discovery and Toxicology", 13th International Conference in Operational Research, KOI-2010, Plenary Talk, Split, Croatia, October 2010.
  53. "Global Optimization of Large Scale Quadratically Constrained MINLP Models", 13th International Conference in Operational Research, KOI-2010, Plenary Talk, Split, Croatia, October 2010.
  54. "Towards large scale deterministic global optimization", Plenary Lecture, International Conference on Optimization: Techniques and Applications, ICOTA-8, Fudan University, Shanghai, China, December 2010.
  55. "Design, simulation and supply chain optimization of hybrid coal, biomass, and natural gas to liquid (CBGTL) processes", Keynote Lecture, ACS, Division of Fuel Chemistry, Anaheim, CA, March, 2011.
  56. "Advances in biclustering methods for re-ordering dense and sparse data matrices in systems biology and drug discovery", Keynote Talk, 8th International Conference on Computational Management Science, CMS-2011, Neuchatel, Switzerland, April 2011.
  57. "Towards Large Scale Global Optimization: Theory and Applications", Plenary Talk, Aachen Conference on Computational Engineering Science, ACCES 2011, Aachen, Germany, July 2011.
  58. "Towards Novel Hybrid Biomass, Coal and Natural Gas to Liquids Systems: Process Synthesis, Global Optimization, and Supply Chain" Plenary Lecture, FOCAPO-2012, Savannah, Georgia, January 2012.
  59. "De Novo Design of Proteins and Protein-Peptide Complexes", Keynote Lecture, 1st Graduate Center Interdisciplinary Student Conference, CUNY, New York, April 2012.
  60. "Towards Large Scale Deterministic Global Optimization", Plenary Lecture, Second International Conference on Network Analysis, Nizhny Novgorod, Russia, May 2012.
  61. "Multi-scale Approaches for Optimizing Novel Hybrid feedstock Energy Processes", Plenary Lecture, 4th International Conference on Multi-scale Structures and Systems in Process Engineering, Chinese Academy of Sciences, Process Engineering Institute, Beijing, September 2012.
  62. "Protein Wisdom: De Novo Protein Design Framework", Plenary Lecture, BIOMAT 2012 International Symposium, Tempe, Arizona, November 2012.
  63. "Advances in De Novo Protein Design", Keynote Lecture, 2012 ASE International Conference on Social Informatics, Cyber Security and Biomedical Computing, December 2012.
  64. "Novel Hybrid Feedstock Energy Processes for Liquid Transportation Fuels & Chemicals", Plenary Lecture, Energy and Mathematical Optimization, BASF, April 2013.
  65. "Novel Hybrid Feedstock Energy Processes for Liquid Transportation Fuels", Plenary Lecture, 3rd International Conference on Sustainable Chemical Product and Process Engineering, Dalian, China, May 2013.
  66. "Hybrid Feedstock Energy Processes: Process Synthesis, Global Optimization, and Supply Chain Analysis", Plenary Lecture, ESCAPE 23, Lappeenranta, Finland, June 2013.
  67. "Global Optimization of Mixed-Integer Quadratically Constrained Quadratic Programs (MIQCQP)", Plenary Lecture, The 4th International Conference on Optimization, Simulation and Control, Ulaanbaatar, Mongolia, July 2013.
  68. "Global Optimization of Mixed-Integer Quadratically Constrained Quadratic Programs (MIQCQP) and Mixed-Integer Signomial Optimization (MISO)", Plenary Lecture, 3rd World Congress on Global Optimization, Huangshan (Yellow Mountains), Anhui, China, July 2013.
  69. "Advances in Global Optimization for Mixed Integer Nonlinear Models", National Award Lecture, HELORS 2013, 2nd International Symposium and 24th National Conference on Operational Research, Athens, Greece, September 2013.
  70. "Thermochemical Conversion of Natural Gas to Liquid Fuels: Process Synthesis and Global Optimization", Keynote Lecture, The 5th Sino-US Conference of Chemical Engineering, Beijing, October 2013.
  71. "Discovery Approach for Shape Selective Separations and Catalysis: Zeolites and Metal Organic Frameworks", Plenary Lecture, International Conference on Interdisciplinary Nanoscience for Energy, Life and Environment, INELE, Hong Kong, December 2013.
  72. "Natural Gas to Liquid Transportation Fuels, (GTL)", Plenary Lecture, Shale Gas Monetization Workshop, La Toretta, Lake Conroe, TX, March 2014.
  73. "A Novel Framework for Carbon Capture, Utilization, and Sequestration, CCUS", Plenary Lecture, Foundations of Computer-Aided Process Design, FOCAPD-2014, Cle Elum, Washington, July 2014.
  74. "Global Optimization of Contrained Grey Box Models", Plenary Lecture, World Congress on Global Optimization, WCGO-2015, February 2015.
  75. "Natural Gas to Liquid Fuels and Chemicals: Process Synthesis and Global Optimization", Keynote Lecture, International Conference on Water, Energy, and Environment, ICWEE, American University of Sharjah, UAE, Sharjah, March 2015.
  76. "Framework for Modelling and Global Optimization of Entire Petrochemical Planning Operations", Plenary Lecture, German Operations Research Society, GOR-AG-Workshop, Ludwigschafen, Germany, April 2015.
  77. "Natural Gas to Liquid Fuels and Chemicals: Process Synthesis and Global Optimization", Plenary Lecture, Mediterranean Gas & Oil International Conference, Beirut, Lebanon, April 2015.
  78. "Discovery Approach for Shape Selective Separations and Catalysts: Zeolites and Metal Organic Frameworks", Plenary Lecture, Characterization of Porous Materials - From Angstroms to Millimeters, CPM-7, Delray Beach, Florida, May 2015.
  79. "Mathematical Optimization in Energy and Health: A 30 Year Roadmap", Induction Lecture, Academy of Athens, May 2015
  80. "A Novel Framework for Carbon Capture, Utilization, and Sequestration, CCUS", Plenary Lecture, Internaional Conference on Energy, Sustainability, and Climate Change, ESCC 2015, Chania, Crete, June 2015.
  81. "Natural Gas to Liquid Fuels and Chemicals", Plenary Lecture, Control, Optimization with Industrial Applications, COIA-2015, Baku, Azerbaijan, August 2015.
  82. Carbon Capture, Utilization, and Sequestration, CCUS: A Multiscale Grand Challenge", 2015 P.V. Danckwerts Memorial Lecture, 10th European Congress of Chemical Engineering, Nice, France, September 2015.

Seminars/Invited Lectures

  1. "Analysis and Synthesis of Flexible Energy Recovery Systems", Department of Chemistry and Chemical Engineering, Stevens Institute of Technology, January 1987.
  2. "Computer-Aided Design", AIChE Central New Jersey Section, February 1987.
  3. "Process Design of Energy Recovery Systems", Department of Chemical Engineering, Aristotle University of Thessaloniki, Thessaloniki, Greece, May 1987.
  4. "APROS : A Discrete-Continuous Optimizer for the Automatic Solution of Mixed Integer Nonlinear/Linear Programming MIN(L)P Problems", Wharton School, University of Pennsylvania, April 1987.
  5. "Strategies for the Optimal Design and Control of Chemical Processes", Eastman KodaK Company, Kingsport Tennessee, June 1988.
  6. "Optimization and Control of Chemical Processes", Shell Development Company, Houston TX, October 1988.
  7. "Chemical Process Synthesis, Optimization and Control", Exxon Corporate Research, Clinton NJ, December 1988.
  8. "Strategies for Optimal Design and Control of Chemical Processes", Department of Chemical Engineering, Clarkson University, April 1989.
  9. "Global Optimum Search In Nonconvex Optimization Problems" Koninklijke/Shell-Laboratorium, Amsterdam, September 1989.
  10. "Optimal Design and Control of Chemical Processes", Koninklijke/Shell, Amsterdam, September 1989.
  11. "Discrete-Continuous Optimization In Process Synthesis", Koninklijke/Shell, Amsterdam, September 1989.
  12. "Discrete-Continuous and Global Optimization In Separation Systems", Department of Chemical Engineering, Rensselaer Polytechnic Institute, November 1989.
  13. "A Primal-Relaxed Dual Global Optimization Approach", Koninklijke/Shell, Amsterdam, January 1990.
  14. "Mathematical Programming In Process Synthesis", Siemens Corporate Research, February 1990.
  15. "A Primal-Relaxed Dual Global Optimization Approach", Rutgers University, Rutgers Center for Operations Research, March 1990.
  16. "A Primal-Relaxed Dual Global Optimization Approach", The Pennsylvania State University, Computer Science Department, April 1990.
  17. "Global Optimization of a Class of Nonconvex NLPs : Theory, Computations and Applications", Columbia University, Department of Chemical Engineering, October 1990.
  18. "A Primal-Relaxed Dual Global Optimization Algorithm : Theory and Computational Results", Global Optimization Conference, Sopron, Hungary, December 1990 (invited paper).
  19. "Global Optimization of a Class of Nonconvex NLPs : Theory, Computations and Applications", GERAD and Ecole Polytechnique de Montr¨ al Canada, April 1991.
  20. "Global Optimization of a Class of Nonconvex NLPs : Theory, Computations and Applications", City University of New York, March 1991.
  21. "Global Optimization of a Class of Nonconvex NLPs : Theory, Computations and Applications", Mobil Research and Development Corporation, Princeton, April 1991.
  22. "Global Optimization of a Class of Nonconvex NLPs : Theory, Computations and Applications", Amoco Chemicals, Naperville, IL, June 1991.
  23. "Enhancement of Dynamic Operability and Robustness Analysis of Multivariable Time Delay Systems", Koninklijke/Shell, Amsterdam, July 1991.
  24. "Global Optimization of Nonlinear Problems : Theory, Computations, and Applications", Department of Chemical Engineering, University of Pennsylvania, February 1992.
  25. "Global Optimization of Nonlinear Problems : Theory, Computations, and Applications", Department of Chemical Engineering and Systems Research Center, University of Maryland, February 1992.
  26. "Global Optimization of Nonlinear Problems : Theory, Computations, and Applications", Department of Chemical Engineering, Northwestern University, February 1992.
  27. "Global Optimization of Nonlinear Problems : Theory, Computations, and Applications", Department of Chemical Engineering, Carnegie-Mellon University, March 1992.
  28. "Global Optimization of Nonlinear Problems", Center for Process Systems Engineering, Imperial College, October 1992.
  29. "Discrete-Continuous and Global Optimization Framework in Process Synthesis", Department of Chemical Engineering, Imperial College, October 1992.
  30. "Discrete-Continuous and Global Optimization Approaches", Department of Chemical Engineering, Cambridge University, November 1992.
  31. "MINLP Approaches in Process Synthesis", Department of Chemical Engineering, UMIST, November 1992.
  32. "Global Optimization of Atomic and Molecular Microclusters", Department of Chemical Engineering, University College, London, December 1992.
  33. "Global Optimization in Chemical Engineering", University of Patras, Greece, October 1992.
  34. "MINLP Approaches in Process Synthesis", University of Liege, Belgium, November 1992.
  35. "Decomposition Methods in Global Optimization", ETH-Zurich, Switzerland, April 1993.
  36. "Discrete-Continuous Approaches in Process Synthesis", ETH-Zurich, Switzerland, June 1993.
  37. "Interaction of Design and Control", ETH-Zurich, Switzerland, June 1993.
  38. "Primal-Relaxed Dual Global Optimization Approaches", EPFL, Switzerland, June 1993.
  39. "Decomposition Methods in Global Optimization", Veszprem University, Hungary, June 1993.
  40. "Primal Dual Methods in Global Optimization", Linkoping University, Department of Mathematics, Sweden, May 1993.
  41. "Global Optimization Approaches via Decomposition", The Royal Institute of Technology, Stockholm, Sweden, May 1993.
  42. "Interaction of Design and Control", Mobil Corporation, Princeton, September 1993.
  43. "Global Optimization in Process Design, and Computational Chemistry", Department of Chemical Engineering, University of Massachussets, May 1994.
  44. "New Optimization Approaches In Design, Control, and Computational Chemistry", Du Pont, Wilmington, Delaware, June 1994.
  45. "Deterministic Global Optimization in Process Design, Control, and Computational Chemistry", IMA, invited lecture, Minneapolis, July 10- 14, 1995.
  46. "Bilevel linear and Quadratic Optimization", Invited Lecture, Linkhoping University, Sweden, November 1995.
  47. "Deterministic Methods in Global Optimization", Department of Mathematics, John Hopkins University, March 1996
  48. "Global Optimization in Design, Control and Computational Chemistry", Department of Chemical Engineering, MIT, February 1996.
  49. "Global Optimization in Design, Control and Computational Chemistry", Technical Chemistry, ETHZ, February 1996.
  50. "Global Optimization for Process Design", Department of Chemical Engineering, University of Rhode Island, April 1997.
  51. "Global Optimization in Design, Control and Computational Chemistry", Department of Chemical Engineering, Notre Dame, April 1997.
  52. "Modelling and Optimization in Computational Chemistry, Biology, and Medicine", Department of Chemical Engineering, Imperial College, London, UK, July 1997.
  53. "Locating All Homogeneous Azeotropes in Nonideal Separations", Du Pont, March 1997.
  54. "Nonlinear and Mixed-Integer Optimization", Department of Computer Science and Operations Research, University of Vienna, June 1997.
  55. "Deterministic Global Optimization : Theory and Applications", Department of Computer Science and Operations Research, University of Vienna, June 1997.
  56. "Global Optimization in Design, Control and Computational Chemistry", Mobil Technology Company, Paulsboro, October 1997.
  57. "Modelling and Optimization for Nesting Problems" General Motors Corporation and Delphi, October 1997.
  58. "Global Optimization In Process Systems Engineering" Mitsubishi Chemicals, Santa Clara, December 1997.
  59. "Interaction of design and control : A MINLP Approach", Optimal Control Conference, Gainesville, Florida, February 1997 (invited).
  60. "A Global Optimization Approach, aBB, for General Twice Differentiable NLPs", Mathematical Programming Symposium, Lausanne, Switzerland, August 1997 (invited).
  61. "Global Optimization in Multiproduct Batch Processes", Mathematical Programming Symposium, Lausanne, Switzerland, August 1997 (invited).
  62. "Global Optimization in Mixed Integer Nonlinear Programming Problems", Conference on Economics and Applications, Nicosia, Cyprus, March 1998 (invited).
  63. "New Framework for Process Synthesis, Design and Control", Department of Chemical Engineering, Aristotle University of Thessaloniki, March 1998.
  64. "Structure Prediction in Computational Chemistry and Molecular Biology" European Conference on Molecular Biology, June 1998, Sweden (invited).
  65. "Global Optimization in Computational Chemistry", HERCMA'98, September 1998, Athens, Greece (invited).
  66. "Structure Prediction in Computational Chemistry and Molecular Biology", Department of Chemical Engineering, The Pennsylvania State University, November 1998.
  67. "Structure Prediction in Protein Folding and Peptide Docking", Department of Computer Science, University of Ioannina, Greece, December 1998.
  68. "Global Optimization in Mixed Integer Nonlinear Problems", Invited Talk, Global Optimization'99, Florence, Italy, September 1999.
  69. "Rigorous Calculations for Phase and Chemical Reaction Equilibrium", Invited Talk, ASPEN Conference, February 2000.
  70. "Structure Prediction in Protein Folding and Peptide Docking", Department of Chemical Engineering, State University of New York, Buffalo, March 2000.
  71. "Global Optimization in Protein Folding", Department of Physics, Michigan Tech University, April 2000.
  72. "Advances in Nonlinear and Mixed-Integer Optimization", Department of Automatic Control, University of Valladolid, Spain, May 2000.
  73. "Advances in Nonlinear and Mixed-Integer Optimization", Department of Automatic Control, University of Salamanca, Spain, May 2000.
  74. "Recent Advances in Global Optimization", Department of Automatic Control, University of Salamanca, Spain, May 2000.
  75. "Deterministic Global Optimization of Optimal Control Problems" Invited Presentation, Ukrainian Academy of Sciences, Kiev, May 2000.
  76. "Structure Prediction in Protein Folding : A Global Optimization Approach", Invited Talk, 4th Annual Green Chemistry and Engineering Conference, National Academy of Sciences, Washington, DC, June 2000.
  77. "Global Optimization of Differential Algebraic Models", Invited Talk, Mathematical Programming Symposium, Atlanta, August 2000.
  78. "Protein Structure Prediction in Computational Chemistry", Michigan State University, November 2000.
  79. "Ab Initio Protein Structure Prediction" (invited lecture), AAAS Meeting, San Francisco, February 2001.
  80. "Secondary Structure Prediction in Protein Folding", Optimization in Bioinformatics, University of Florida, Gainesville, February 2001.
  81. "Structure Prediction in Protein Folding", Department of Chemical Engineering, University of Minnesota, March 2001.
  82. "Deterministic Global Optimization", Department of Chemical Engineering, University of Singapore, July 2001.
  83. "Structure Prediction in Protein Folding", Department of Chemical Engineering, Georgia Institute of Technology, October 2001.
  84. "Global Optimization in Protein Folding", Applied Mathematics, Cornell University, October 2001.
  85. "Structure Prediction in Protein Folding, Department of Chemical Engineering, Ohio State University, October 2001.
  86. "Protein Structure Prediction and De Novo Peptide Design: Advances and Challenges", (invited lecture), Biomedical Engineering conference, University of Ioannina, Metsovo, Greece, February 2002.
  87. "Advances in Protein Structure Prediction", Department of Biomedical Engineering, University of Florida, April 2002.
  88. "Structure Prediction in Protein Folding", Department of Chemical Engineering, Iowa State University, April 2002.
  89. "Recent Advances in Deterministic Global Optimization", Department of Chemical Engineering, National Taiwan University, June 2002.
  90. "Structure Prediction in Protein Folding", ITRI, Taiwan, June 2002.
  91. "Continuous-time Formulations for Scheduling Problems" ITRI, Taiwan, June 2002.
  92. "Structure Prediction in Protein Folding: Advances and Challenges", Department of Chemical Engineering, University of California at Berkeley, October 2002.
  93. "Structure Prediction in Protein Folding: Advances and Challenges", Department of Chemical Engineering, California Institute of Technology, October 2002.
  94. "Systems Approaches in Bioinformatics and Computational Genomics", (Invited Lecture), Information and Communications Workshop, National Academy of Sciences, November 2002.
  95. "Structure Prediction in Protein Folding: Advances and Challenges", Department of Chemical Engineering, University of Texas at Austin, December 2002.
  96. "Structure Prediction in Protein Folding: Advances and Challenges", Department of Chemical Engineering, Worchester Polytechnic Institute, April 2003.
  97. "Structure Prediction in Protein Folding: Advances and Challenges", Department of Chemical Engineering, Purdue University, May 2003.
  98. "Novel Continuous Time Framework for Scheduling Manufacturing Processes", BASF, Germany, June 2003.
  99. "Advances In Deterministic Global Optimization: I. Constrained Nonlinear and Mixed Integer Nonlinear Models", BASF, Germany, June 2003.
  100. "Advances In Deterministic Global Optimization: II. Enclosure of All Solutions, Bilevel Nonlinear Optimization, Design Under Uncertainty, and Differential Algebraic Systems", BASF, Germany, June 2003.
  101. "Scientific Computing in Product and Process Discovery", BASF, Germany, June 2003.
  102. "Advances in Protein Structure Prediction and De novo Peptide Design", BASF, Germany, June 2003.
  103. "A New Class of Convex Underestimators for Global Optimization", Mathematical Programming meeting, Copenhagen, Denmark, August 2003.
  104. "Increased Productivity of a Polymer Compounding Plant Through Leading Edge Mathematics", BASF, Germany, September 2003.
  105. "Structure Prediction In Protein Folding: Advances and Challenges", Department of Chemical Engineering, New Jersey Institute of Technology, December 2003.
  106. "Structure Prediction In Protein Folding: Advances and Challenges", Department of Chemical Engineering, Johns Hopkins University, December 2003.
  107. "Structure Prediction in Protein Folding", Department of Chemical Engineering, Texas A&M Univerity, February 2004.
  108. "Advances in Scheduling Methods", BASF Corporation, March 2004.
  109. "Topology and Uncertainty in Signal Transduction Networks" Department of Applied Mathematics, Columbia University, April 2004.
  110. "Structure Prediction in Protein Folding", Department of Chemical Engineering, Rutgers University, April 2004.
  111. "Advances in Protein Folding and De Novo Protein Design", Siemens Corporation, Princeton, June 2004.
  112. "Structure Prediction in Protein Folding", Department of Chemical Engineering, Imperial College, London, June 2004.
  113. "Topology and Uncertainty in Signal Transduction Networks", Invited Talk INFORMS 2004, Denver, Colorado, October 2004.
  114. "Research Challenges, Opportunities and Synergism in Systems Engineering and Computational Biology", Invited Talk, Annual AIChE meeting, Austin, Texas, November 2004.
  115. "First Principles Protein Structure Prediction", Department of Biophysics, Cornell Medical School, January 2005.
  116. "Protein Structure Prediction: Advances and Challenges", Department of Chemistry, City College New York, February 2005.
  117. "Reactive Scheduling and Uncertainty", BASF Corporation, Ludwigschafen, Germany, February, 2005.
  118. "De Novo Protein Design with Flexible Templates", Invited Talk, 5th International Conference on Relaxations in Complex Systems, Lille, France, July 2005.
  119. "Large Scale Robust Optimization in Challenging Scheduling Problems", invited talk, Large-Scale Robust Optimization Workshop, Santa Fe, September 2005.
  120. "A Novel in silico Approach for De Novo Protein Design with Flexible templates", invited talk, 2005 ISQBP Loew Memorial Meeting, College of Staten Island, October 2005.
  121. "De Novo Protein Design: Advances and Challenges", Department of Chemical Engineering, Northwestern University, October 2005.
  122. "De Novo Protein Design: Advances and Challenges", Department of Chemical Engineering, Texas Tech University, November 2005.
  123. "De Novo Protein Design: Advances and Challenges", Department of Chemical Engineering, City College New York, December 2005.
  124. "On the NSF Panel Assignment Problem", National Institutes of Health, Bethesda, January 2006.
  125. "De Novo Protein Design", Medical School, Thomas Jefferson University, March 2006.
  126. "Advances in Global Optimization", Department of Chemical Engineering, RTWH Aachen University, March 2006.
  127. "De Novo Protein Design", Department of Chemical and Biological Engineering, Koc University, Istanbul, Turkey, May 2006.
  128. "A Novel Approach for the Generalized Assignment Problem", Invited Lecture, GOR Conference, Ludwigschafen, Germany, May 2006
  129. "Advances in Global Optimization", Invited Lecture, Institute of Information Management, National Chiao Tung University, Hsinchu, Taiwan, June 2006.
  130. "Short and Medium Term Scheduling", Invited Lecture, Taiwan O.R. Society, National Cheng Chi University, Taipei, Taiwan, June 2006.
  131. "Structure Prediction of alpha helical Proteins", Invited Lecture, INFORMS international conference, Hong Kong, June 2006.
  132. "De Novo Protein Design", Invited Lecture, INFORMS international conference, Hong Kong, June 2006.
  133. "Advances and Challenges in Computational Biology and Genomics", Invited Lecture, Lerner Research Institute, Cleveland Clinic, Cleveland, July 2006.
  134. "De Novo Protein Design In Computational Genomics", Polymer Processing Institute, New Jersey Institute of Technology, December 2006.
  135. "A Novel Clustering Approach and Prediction of Optimal Number of Clusters: Global Optimum Search", Invited Presentation, INFORMS Annual Meeting, Pittsburgh, November 2006.
  136. "Short-term, Medium-term and Reactive Scheduling of an Industrial Batch Plant", Invited Presentation, INFORMS Annual Meeting, Pittsburgh, November 2006.
  137. "A Novel In Silico Approach for De Novo protein Design", Invited Talk, SIAM Conference on Computational Science and Engineering, Costa Mesa, CA, February 2007.
  138. "Deterministic Global Optimization", Invited Lecture, Workshop on Global Optimization: Methods and Applications, Fields Institute, Toronto, Canada, May 2007.
  139. "Bio-Systems Engineering: Advances and Challenges in Protein Structure Prediction, Signal Transduction Networks, and Proteomics", Imperial College, London, July 2007.
  140. "Advances and Challenges in De Novo Protein Design", Invited Lecture, EURO-CBBM in Computational Biology, Bioinformatics and Medicine, Prague, Czech Republic, July 2007.
  141. "Deterministic Global Optimization: Advances in Convex Underestimation Methods and Applications", Invited Lecture, New Problems and Innovative Methods in Nonlinear Optimization, 46th Workshop, Erice, Italy, August 2007.
  142. "De Novo Protein Design in Computational Genomics: Advances and Challenges", Distinguished Lecture Series in Systems Biology, Georgia Institute of Technology, October 2007.
  143. "De Novo Protein Design in Computational Genomics", Tufts University, October 2007.
  144. "Prediction of interhelical contacts and tertiary structure in alpha helical globular proteins", Invited Lecture, Workshop on Protein Folding, Institute of Mathematics, IMA, University of Minnesota, January 2008.
  145. "Recent Advances and Challenges in Deterministic Global Optimization", University of Guelph, Canada, February, 2008.
  146. "Advances In Deterministic Global Optimization", Shell International Exploration & Production B.V., March, 2008.
  147. "Deterministic Global Optimization: Advances and Challenges", Institute of Mathematics and Its Applications, IMA, University of Minnesota, April, 2008.
  148. "De Novo Protein Design: Advances and Challenges", Department of Structural and Chemical Biology, Mount Sinai School of Medicine, April 2008.
  149. "Advances In Scheduling of Chemical Processes", Institute of Chemical Engineering, Bulgarian Academy of Sciences, Sofia, May 2008.
  150. "Structure Prediction in Protein Folding, De Novo Protein Design and Proteomics", Invited Lectures, PASI2008, Pan American Advanced Studies Institute on Emerging Trends in Process Systems Engineering, August, 2008.
  151. "Residue-residue hydrophobic contact prediction for alpha-helical proteins via MILP optimization", Invited presentation, INFORMS Annual meeting, October 2008.
  152. "Integration of operational planning and medium term scheduling under uncertainty", Invited presentation, INFORMS Annual meeting, October 2008.
  153. "Biosystems Engineering: Advances and challenges in protein structure prediction, signal transduction networks, and proteomics", Department of Chemical Engineering, National University of Singapore, October 2008.
  154. "De novo protein design: Advances and challenges", Department of Chemical Engineering, University of Oklahoma, November 2008.
  155. "Optimal methods for re-ordering data matrices in systems biology and drug discovery", Invited Lecture, 4th International Conference on High Performance Scientific Computing, Hanoi, Vietnam, March 2009.
  156. "De novo protein design in computational genomics", Department of Chemical Engineering and Applied Chemistry, University of Toronto, Canada, March 2009.
  157. "De novo design of proteins and protein-peptide complexes: Advances and challenges", Department of Chemical Engineering, McMaster University, Canada, March 2009.
  158. "De novo design of proteins and protein-peptide complexes: Advances and challenges", Department of Chemical Engineering, University of Manchester, Manchester, England, April 2009.
  159. "Scheduling and Planning of Chemical Processes", Princeton Consultants, Princeton, NJ, April 2009.
  160. "Novel biclustering methods for reordering data matrices in systems biology and drug discovery applications", Invited Lecture, Data Mining in Biomedicine Conference, DMINBIO-09, Athens, Greece, May 2009.
  161. "Predicting in vivo toxicities using optimal methods for re-ordering and machine learning", Invited Lecture, ToxCast Data Analysis Summit, US EPA, Research Triangle Park, NC, May 2009.
  162. "Discovery in proteomics: Targeted and untargeted methods for the identification of post-translational modifications using tandem mass spectrometry", The 3rd Annual System Toxicology Symposium, EOHSI, UMDNJ, Piscataway, NJ, May 2009.
  163. "Biosystems Engineering: Advances in protein structure prediction and proteomics", Department of Automation, Shanghai Jiaotong University, May 2009.
  164. "Systems Engineering as a Driver for Discovery", Invited Lecture, CES-Get-Together, RTWH Aachen University, May 2009.
  165. "Systems Engineering Thinking for Discovery at Multiple Scales", Faculty of Information Technology, University of Pannonia, Veszprem, Hungary, July 2009.
  166. "Global Optimization of an Extended Pooling Problem with EPA Emissions Constraints", invited presentation, 20th International Symposium on Mathematical Programming, ISMP-2009, Chicago, August 2009.
  167. "Predicting in vivo toxicities using optimal methods for re-ordering and logistic regression", Invited Presentation, InnovationWell Conference, Bryn Mawr University, October 2009.
  168. "Challenges and Opportunities in Computational Biology", Graduate Colloquium, Northern Illinois University, November 2009.
  169. "De Novo Protein Design: Advances and Challenges", Graduate Colloquium, Northern Illinois University, November 2009.
  170. "Discovery of entry inhibitors for HIV-1 via a novel de novo protein design framework and experimental validation" Invited, Session honoring James Wei, Annual AIChE Meeting, Nashville, November 2009.
  171. "Deterministic global optimization: Theoretical advances and applications", Wuhan University of Science and Technology, Wuhan, China, January 2010.
  172. "Novel continuous time frameworks for short and medium term scheduling of manufacturing processes", Wuhan University of Science and Technology, Wuhan, China, January 2010.
  173. "Optimization frameworks for production scheduling and planning", Bayer GmbH, Leverkusen, Germany, February 2010.
  174. "Advances in de novo protein design and in vitro to in vivo predictions in toxicology" Bayer GmbH, Leverkusen, Germany, February 2010.
  175. "De Novo Design of Proteins and Protein-Peptide Complexes: Advances and Challenges", Department of Chemical Engineering, University of Illinois at Chicago, April 2010.
  176. "Discovery Through Systems Engineering Thinking", Invited Lecture, Department of Chemical Engineering, Tsinghua University, Beijing, China, May 2010.
  177. "Towards Hybrid Energy Processes", Invited Lecture, Institute of Process Engineering, Chinese Academy of Sciences, Beijing, China, May 2010.
  178. "Advances in Biclustering Methods for Re-ordering Data Matrices in Systems Biology, Drug Discovery, and Prediction of In Vivo Toxicities from In Vitro Experimental Data", Workshop on Optimization and Data Analysis in Biomedical Informatics, Invited Lecture, Fields Institute, Toronto, Canada, June 2010.
  179. "De Novo Protein Design", Workshop on Nonlinear Optimization, Variational Inequalities and Equilibrium Problems, Invited Lecture, Erice, Italy, July 2010.
  180. "De Novo Protein Design: Advances and Challenges", School of Chemical Engineering, Purdue University, West Lafayette, IN, October 2010.
  181. "Deterministic Global Optimization", Invited Talk, Abo Akademi University, Turku, Finland, November 2010.
  182. "De Novo Design of Proteins and Protein-Peptide Complexes", Invited Talk, Abo Akademi University, Turku, Finland, November 2010.
  183. ""De Novo Design of Proteins and Protein-Peptide Complexes: Advances and Challenges", Institute of Bioengineering and Nanotechnology, Singapore, March 2011.
  184. "Advances in Production Scheduling and Planning Under Uncertainty", Wuhan University of Science and Technology, Wuhan, China, March 2011.
  185. "Deterministic Global Optimization: Advances and Challenges", Wuhan University of Technology, Wuhan, China, March 2011.
  186. "Novel Continuous Time Frameworks for Scheduling of Manufacturing Processes", Wuhan Iron and Steel Institute, Wuhan, China, March 2011.
  187. "Hybrid Biomass, Coal, and Natural Gas to Liquids (CBGTL) Systems: Design, Simulation and Supply Chain Optimization", Chinese Academy of Sciences, Beijing, April 2011.
  188. "Towards Large Scale Deterministic Global Optimization", Chinese Academy of Sciences, Beijing, April 2011.
  189. "Hybrid Biomass, Coal, and Natural Gas to Liquids (CBGTL) Systems: Design, Simulation and Supply Chain Optimization" Department of Chemical Engineering, National Technical University of Athens, Greece, May 2011.
  190. "De novo design of proteins and protein-peptide complexes", Department of Chemical Engineering, National Technical University of Athens, Greece, May 2011.
  191. "Novel Hybrid Energy Processes", Shenhua Corporation, Beijing, China, June 2011.
  192. "Novel Hybrid Energy Processes", Guodian Corporation, Beijing, China, June 2011.
  193. "De Novo Protein Design", Constellation Pharmaceuticals, Boston, September 2011.
  194. "Advances in Process Operations of Batch and Continuous Processes", Process Engineering Institute, Chinese Academy of Sciences, Beijing, China, November 2011.
  195. "Towards Large Scale Deterministic Global Optimization", Department of Industrial Engineering, University of Pittsburgh, November 2011.
  196. "De Novo Design of Proteins and Protein-Peptide Complexes", Center for Advanced Biotechnology and Medicine, Department of Biochemistry, UMDNJ, December 2011.
  197. "Towards Hybrid Feedstock Energy Processes", PetroChina, Beijing, China, February 2012.
  198. "Zeolites for Catalysis and Shape Selective Separation" PetroChina, Beijing, China, March 2012.
  199. "Novel Hybrid Feedstock Energy Processes: Process Synthesis, Global Optimization, and Supply Chain", ExxonMobil, Clinton, NJ, March 2102.
  200. "Biclustering Methods and their Applications", Summer school on Operational Research and Applications, Higher school of Economics, Nizhny Novgorod, Russia, May 2012.
  201. "De Novo Design of Peptides, Proteins, and Protein Peptide Complexes", PICSciE Conference: Research Computing at Princeton, May 2012.
  202. "Nonlinear Mixed-Integer Optimization and Global Optimization with Process Design, Process Synthesis, and Process Operations Applications", China University of Petroleum, Beijing, May 2012.
  203. "De Novo Design of Peptides, Proteins, and Protein Peptide Complexes", Pfizer Corporation, Cambridge, MA, June 2012.
  204. "Global Optimization of MIQCQP Problems", National Chiao Tung University, Taiwan, June 2012.
  205. "Novel Hybrid Biomass, Coal, and Natural Gas to Liquids CBGTL Systems: Process Design, Process Synthesis, Global Optimization, and Supply Chain Optimization", Department of Chemical and Biological Engineering, Northwestern University, October 2012.
  206. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations and Catalysis: Theoretical Advances and Applications", Centre for Process Systems Engineering, Department of Chemical Engineering, Imperial College, London, November 2012.
  207. "Novel Natural Gas to Liquids Processes: Process Synthesis and Global Optimization", China Datang Corporation Renewable Power, Beijing, December 2012.
  208. "Advances in Deterministic Global Optimization for MIQCQP and Mixed Integer Signomial Optimization, MISO", GERAD, University of Montreal, Montreal, Canada, January 2013.
  209. "Discovery of Novel Materials for Shape Selective Separations and Catalysis", Primus Energy, Hillsborough, NJ, February 2013.
  210. "Biomass and natural gas to liquid transportation fuels", Expeditionary Power and Energy Workshop", MITRE Corporation, McLean VA, March 2013.
  211. "Novel Hybrid Biomass, Coal, and Natural Gas to Liquids CBGTL Systems: Process Design, Process Synthesis, Global Optimization, and Supply Chain Optimization", Department of Chemical and Biological Engineering, Texas A&M University, March 2013.
  212. "Global Optimization for Mixed Integer Quadratically Constrained, MIQCQP, and Mixed Integer Signomial Optimization, MISO", BASF, Ludwigshafen, Germany, April 2013.
  213. "De Novo Design of Monomeric Proteins, Protein Peptide Complexes, and Multimeric Peptides", MIT Distinguished Speaker Series in Computational Science and Engineering, MIT, Boston, April 2013.
  214. "A Novel Optimization Framework for the Design of Proteins with Post Translational Modifications and Unnatural Amino Acids", Computational Biophysics to Systems Biology, CBSB-2013, Norman, OK, May 2013.
  215. "Advances in Production Scheduling of Batch and Continuous Processes under Uncertainty", Northeastern University, The Logistics Institute, Shenyang, China, May 2013.
  216. "Thermochemical Conversion of Natural Gas to Liquid Transportation Fuels: Process Synthesis, Global Optimization, and Supply Chain Strategies", Energy Systems Initiative Webinar, Carnegie Mellon University, October 2013.
  217. "Hybrid Feedstock Energy Processes: Process Synthesis, Global Optimization, and Supply Chain Analysis", Department of Mechanical Engineering, University of Alberta, Edmonton, Canada, November 2013.
  218. "Novel Hybrid Feedstock Energy Processes for Liquid Transportation Fuels", SynFuels Corporation, Beijing, November 2013.
  219. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations", Syn-Fuels Corporation, Beijing, November 2013.
  220. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations: Theoretical Advances and Applications", School of Chemical Engineering, Purdue University, December 2013.
  221. "Advances in Deterministic Global Optimization for Mixed-Integer Nonlinear Models", Department of Industrial Engineering, Texas A&M University, March 2014.
  222. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations: Theoretical Advances and Applications", Department of Chemical Engineering, Texas A&M University, April 2014.
  223. "Natural Gas to Liquid Transportation Fuels: Process Synthesis, Global Optimization, and Supply Chain Strategies", Mays Business School, Texas A&M University, April 2014.
  224. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations: Theoretical Advances and Applications, Department of Chemical Engineering, University of Texas at Austin, May 2014.
  225. "Discovery and Computational Characterization of Novel Materials for Shape Selective Separations: CO2 Capture, Utilization, and Sequestration", East China University of Science and Technology, Shanghai, China, June 2014.
  226. "Hybrid Feedstock Energy Processes: Process Synthesis, Global Optimization, and Supply Chain Systems", East China University of Science and Technology, Shanghai, China, June 2014.
  227. "Discovery and Compuational Characterization of Novel Materials for Shape Selective Separations: CO2 Capture, Utilization, and Sequestration", Distinguished Lecture Series, Texas A&M Qatar, January 2015
  228. "Natural Gas to Liquid Transportation Fuels: Process Synthesis, Global Optimization, and Supply Chain Strategies", Sinopec, Beijing, May 2015.
  229. "Hybrid Feedstock Energy Processes: Process Synthesis, Global Optimization, and Supply Chain Systems", Sinopec, Beijing, May 2015.
  230. "Advances in Deterministic Global Optimization: From Theory to Algorithmic Methods, to Compuational Tools, to Applications", (3 Lectures), 4th Summer School of the International Max Planck Research School for Advanced Methods in Process and Systems Engineering, Magdeburg, Germany, September 2015.
  231. "Novel Hybrid Feedstock Processes for the Production of Liquid Transportation Fuels", Distinguished Lecture, Wayne State University, October 2015.
  232. "Improved Approach for Short and Medium Term Scheduling of Steelmaking Continuous Casting Process", Wuhan University of Science and Technology, October 2015.
  233. "Carbon Capture, Utilization, and Sequestration", Distinguished Lecture, Department of Chemical Engineering, Western University, Canada, November 2015.

Scholarly Conference Presentations

  1. "Synthesis of Heat Exchanger Networks for Multiperiod Operation", Annual AIChE Meeting, San Francisco, CA, November 1984.
  2. "A New Approach for Evaluating Flexibility in Chemical Process Design", Process System Engineering Conference, PSE'85, Cambridge, England, April 1985.
  3. "Automatic Synthesis and Optimization of Heat Exchanger Networks", Chemical Engineering Conference, CHEMECA'85, Australia, August 1985.
  4. "Active Constraint Strategy for Flexibility Analysis in Chemical Processes", Annual AIChE Meeting, Chicago, IL, November 1985.
  5. "Automatic Synthesis of Optimum Heat Exchanger Network Configurations", Annual AIChE Meeting, Chicago, IL, November 1985.
  6. "Automatic Synthesis of Flexible Heat Exchanger Networks for Multiperiod Operation", Annual ASME Meeting, Advanced Energy Systems, Annaheim, CA, December 1986.
  7. "Synthesis of Flexible Heat Exchanger Networks with Uncertain Flowrates and Temperatures", National AIChE Meeting, Houston, TX, March 1987.
  8. "Synthesis of Flexible Heat Exchanger Networks", Chemical Engineering Fundamentals Conference, CEF'87, Taormina, Sicily, Italy, April 1987.
  9. "Design of Multiperiod Distillation Sequences", Foundations of Computer-Aided Operations Conference, FOCAPO'87, Park City, Utah, July 1987.
  10. "Research Issues In Design Theory and Methodology" International Congress On Planning and Design Theory, Boston, MA, August 1987.
  11. "APROS: A Mixed-Integer Linear Programming Solver", Operations Research and Management Science Meeting, St. Louis, MI, October 1987.
  12. "A Discrete-Continuous Optimizer for the Automatic Solution of Mixed-Integer Nonlinear Programming Problems", Operations Research and Management Science Meeting, St. Louis, MI, October 1987.
  13. "Design and Analysis of Heat-Integrated Distillation Sequences for Multiperiod Operation", Annual AIChE Meeting, New York, NY, November 1987.
  14. "Simultaneous Process Synthesis and Control of Chemical Processes", Annual AIChE Meeting, New York, NY, November 1987.
  15. "A Mixed-Integer Nonlinear Programming Formulation for the Synthesis of Heat-Integrated Distillation Sequences", Annual AIChE Meeting, New York, NY, November 1987.
  16. "Optimization Model for Retrofitting Heat Exchanger Networks", Understanding Process Integration II Conference, UMIST, Manchester, England, March 1988.
  17. "Multicomponent Multi-feed Multi-product Synthesis of Distillation Sequences", Understanding Process Integration II Conference, UMIST, Manchester, England, March 1988.
  18. "A Retrofit Approach for Heat Exchanger Networks", National AIChE Meeting, New Orleans, March 1988.
  19. "An Automatic Solver of MINLP Problems on the PC", National AIChE Meeting, New Orleans, March 1988.
  20. "Generic Rank Determination of Structural Matrices", Conference on Information Sciences and Systems, Princeton University, March 1988.
  21. "On Global Optimality of the Pooling Problem", Operations Research and Management Science Meeting, Washington, DC, April 1988.
  22. "Global Optimum Issues in the Synthesis of Heat Exchanger Networks", Process System Engineering Conference, PSE'88, Sydney, Australia, August 1988.
  23. "Simultaneous Optimization of Matches and Network Configurations In Heat Exchanger Synthesis", Annual AIChE Meeting, Washington DC, November 1988.
  24. "A MINLP Formulation for the Retrofit of Heat Exchanger Networks", Annual AIChE Meeting, Washington DC, November 1988.
  25. "Global Optimum Search for a Class of Non-convex NLP and MINLP Problems", Annual AIChE Meeting, Washington DC, November 1988.
  26. "An Optimization Strategy for the Synthesis of Feasible Control Systems", AIChE Meeting, Washington DC, November 1988.
  27. "Synthesis of Non-sharp Separation Sequences", National AIChE Meeting, Houston TX, April 1989.
  28. "Global Optimum Search In Non-convex Quadratic Programming Problems", Operations Research and the Institute of Management Science Meeting, Vancouver, Canada, May 1989 (invited paper).
  29. "Global Optimum Search In Nonconvex Design Problems", NSF Design Theory Conference, Umass, Amherst, June 1989.
  30. "Structural Properties of Large-Scale Systems", American Control Conference, Pittsburgh, PA, June 1989.
  31. "Simultaneous Process Synthesis and Control : Minimization of Disturbance Propagation In Heat Recovery Systems", Foundations of Computer-Aided Process Design Meeting, Snowmass, Colorado, July 1989.
  32. "Optimal Synthesis of Reactor Networks", Computer-Integrated Process Engineering Conference, Leeds, England, September 1989.
  33. "A New Approach for Phase and Chemical Equilibrium Problems", Annual AIChE Meeting, San Francisco, CA, November 1989.
  34. "Optimal Synthesis of Isothermal Complex Reactor Networks", Annual AIChE Meeting, San Francisco, CA, November 1989.
  35. "Synthesis of Isothermal Reactor-Separator-Recycle Systems", Annual AIChE Meeting, San Francisco, CA, November 1989.
  36. "A Mixed Integer Nonlinear Programming Model for Retrofitting Heat Exchanger Networks", NSF Design and Manufacturing Systems Grantees Conference, January 1990.
  37. "A New Approach for Pseudo-Pinch Heat Exchanger Network Design", AIChE Spring National Meeting, March 1990.
  38. "Optimal Synthesis of Nonsharp Separation Sequences", Conference on Computer Applications in Chemical Engineering, Hague, The Netherlands, May 1990.
  39. "A New Optimization Approach for Phase and Chemical Equilibria", International Federation of Operations Research, IFORS'90, Athens, Greece, June 1990.
  40. "Global Optimum Search for Nonconvex NLP and MINLP Problems", International Federation of Operations Research, IFORS'90, Athens, Greece, June 1990.
  41. "A Primal-Relaxed Dual Global Optimization Approach", SIAM Annual Meeting, Chicago, July 1990.
  42. "Stochastic Programming in Process Synthesis : A Two-Stage Model with MINLP Recourse", ORSA/TIMS Meeting, Philadelphia, October 1990.
  43. "An Analytical Approach to Constrained Global Optimization" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  44. "Stochastic Programming In Process Synthesis : A Two-Stage Model With MINLP Recourse For Heat Integrated Multiperiod Distillation Sequences" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  45. "Global Optimization of Problems With Polynomial Functions and Constraints" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  46. "Heat Exchanger Network Synthesis Without Decomposition" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  47. "Synthesis of Heat Integrated Nonsharp Distillation Sequences" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  48. "Strategies For Improving Dynamic Operability In MIMO Systems With Time Delays" Annual AIChE Meeting, Chicago, Illinois, November 1990.
  49. Heat Exchanger Network Optimization", National AIChE Meeting, Houston, Texas, April 1991.
  50. "A Primal-Relaxed Dual Global Optimization Algorithm", Optimization Days Conference, Montreal, Canada, May 1991.
  51. "Unconstrained and Constrained Global Optimization of Polynomials In One Variable", Recent Advances In Global Optimization Conference, Princeton, May 1991.
  52. "A Primal-Relaxed Dual Global Optimization Approach: Theory, Computations and Applications", Fourth World Congress of Chemical Engineering, Karlshrue, Germany, June 1991.
  53. "A Global Optimization Algorithm (GOP) for Certain Classes of Nonconvex NLPs - III. New Properties for Improved Computational Performance", Process Systems Engineering Conference, PSE'91, Montebello, Canada, August 1991.
  54. "Interaction of Process Design and Control : Improving Dynamic Operability in Multivariable Time Delay Systems", Process Systems Engineering Conference, PSE'91, Montebello, Canada, August 1991.
  55. "An MILP Relaxed Dual Formulation and New Properties for the GOP Algorithm", Annual AIChE Meeting, Los Angeles, November 1991.
  56. "Assessment and Enhancement of Dynamic Operability of Multivariable Time Delay Systems with Transmission Zeroes", Annual AIChE Meeting, Los Angeles, November 1991.
  57. "Synthesis of Nonisothermal Complex Reactor Networks", Annual AIChE Meeting, Los Angeles, November 1991.
  58. "Decomposition Techniques in Global Optimization", TIMS/ORSA Meeting, Orlando, Florida, April 1992.
  59. "Global Optimization In Microclusters", SIAM Meeting, Chicago, May 1992.
  60. "Decomposition Techniques in Global Optimization", SIAM Meeting, Chicago, May 1992.
  61. "A Global Optimization Approach for Lennard Jones Microclusters", Optimization Days Conference, Montreal, Canada, May 1992.
  62. "A Decomposition Approach for the Global Optimization of Linear Bilevel Programming Problems", EURO TIMS Conference, Helsinki, Finland, June 1992.
  63. "Global Optimization in Phase and Chemical Reaction Equilibrium Problem", Annual AIChE Meeting, Miami, 1992.
  64. "A Multi-objective Approach for the Interaction of Design and Control" Annual AIChE Meeting, Miami, 1992.
  65. "Robust Control of Linear and Nonlinear Systems with Real Parametric Uncertainty", Annual AIChE Meeting, Miami 1992.
  66. "Stability Issues in Optimal Design", Annual AIChE Meeting, Miami, 1992.
  67. "A Global Optimization Approach for Lennard-Jones Microclusters", Annual AIChE Meeting, Miami 1992.
  68. "Computational Experience with GOP", Annual AIChE Meeting, Miami, 1992.
  69. "A Global Optimization Method for Weber's Problem with Attraction and Repulsion", Large-Scale Optimization Conference, Gainesville, FL, February, 1993.
  70. "Global Optimization in Generalized Geometric Programming", ORSA/TIMS meeting, October 1993.
  71. "Obtaining Globally Minimum Tangent Plane Distances for the Stability Problem", Annual AIChE Meeting, St Louis, November 1993.
  72. "Global Minimum Potential Energy Conformations of Small Molecules", AIChE meeting, St. Louis, November 1993.
  73. "Synthesis of Mass Exchange Networks Without Decomposition", Annual AIChE Meeting, St. Louis, November 1993.
  74. "Analyzing the Interaction of Design and Control in a Reactor Separator Recycle System", November 1993.
  75. "Global Optimization for the Phase Equilibrium Problem", ESCAPE-4, Dublin, Ireland, March 1994.
  76. "Interaction of Design and Control", Process Systems Engineering 1994, Korea, June 1994.
  77. "New Optimization Methods In Design and Control", AIChE Central N.J. Section, May 1994.
  78. "Global Optimization in Phase and Chemical Equilibrium", Mathematical Programming Meeting, Ann Arbor, Michigan, August 1994.
  79. "Review and new Advances in the GOP approach", Mathematical Programming Meeting, Ann Arbor, Michigan, August 1994.
  80. "Global Optimization in Molecular Structure Determination", Mathematical Programming Meeting, Ann Arbor, Michigan, August 1994.
  81. "Algorithmic Approaches in Process Synthesis", Foundations of Computer Aided Process Design, FOCAPD'94, Snowmass, Colorado, July 1994.
  82. "Global Solutions for the Phase and Chemical Reaction Equilibrium Problem", Annual AIChE meeting, San Francisco, November 1994.
  83. "A Global Optimization Algorithm for Generalized Geometric Programming Problems", Annual AIChE meeting, San Francisco, November 1994.
  84. "Distributed Computing Approaches in Global Optimization", Annual AIChE meeting, San Francisco, November 1994.
  85. "aBB : A Global Optimization Method for General Constrained Nonconvex Problems", State of the Art in Global Optimization Conference, Princeton University, Princeton, N.J., April 1995.
  86. "A Decomposition based Global Optimization Approach for solving Bilevel linear and Quadratic Programs", State of the Art in Global Optimization Conference, Princeton University, Princeton, N.J., April 1995.
  87. "Distributed Decomposition based Approaches in Global Optimization", State of the Art in Global Optimization Conference, Princeton University, Princeton, N.J., April 1995.
  88. "Finding All Solutions of Nonlinearly Constrained Systems of Equations", State of the Art in Global Optimization Conference, Princeton University, Princeton, N.J., April 1995.
  89. "A Deterministic Global Optimization Approach for the Protein Folding Problem", DIMACS Conference on Protein Folding, March 1995.
  90. "New Branching Schemes and Reformulations for the GOP Approach", IFORS Engineeriong Design Conference, St. Louis, October 1995.
  91. "Global Optimization of Generals Constrained NLPs", IFORS Engineeriong Design Conference, St. Louis, October 1995.
  92. "A Global Optimization Approach, aBB, for Constrained NLPs" INFORMS, New Orleans, November 1995.
  93. "Global Minimum Total Potential Energy Conformations of Oligopeptides", Annual AIChE Meeting, Miami, Florida, November 1995.
  94. "Finding All Multiple Steady States of Process Systems", Annual AIChE Meeting, Miami, Florida, November 1995.
  95. "Analysis and Design of Biochemical Reaction Networks via MILP Optimization", Annual AIChE Meeting, Miami, Florida, November 1995.
  96. "aBB: A New Global Optimization Approach for General Continuous Nonlinear Problems", Annual AIChE Meeting, Miami, Florida, November 1995.
  97. "Distributed Branch and Bound Algorithms for Global Optimization", Annual AIChE Meeting, Miami, Florida, November 1995.
  98. "Rigorous Global Optimization for General NLPs", 2nd Global Optimization Conference, Szeged, Hungary, December 1995.
  99. "A Global Optimization Method aBB for Process Design", Conference ESCAPE'96, Rhodes, Greece, May 1996.
  100. "Locating All Homogeneous Azeotropes in Nonideal Separations", Conference ESCAPE'96, Rhodes, Greece, May 1996.
  101. "Prediction of Oligopeptide Conformations via Deterministic Global Optimization", Invited Lecture at ACS Meeting in Protein Folding, Orlando, Florida, August 1996.
  102. "Finding all homogeneous azeotropes", Annual AIChE Meeting, Chicago, November 1996.
  103. "Valid Convex Underestimating Problems for Process Design Optimization", Annual AIChE Meeting, Chicago, November 1996.
  104. "Interaction of design and control : Optimization with dynamic models", Annual AIChE Meeting, Chicago, November 1996.
  105. "Global Optimization in Multiproduct Batch Design Under Uncertainty", Annual AIChE Meeting, Chicago, November 1996.
  106. "Analysis and Design of Regulatory Architectures in Metabolic Reaction Networks", Annual AIChE Meeting, Chicago, November 1996.
  107. "Mixed-Integer Nonlinear Optimization in Process Synthesis", Apen Tech. World'97, Boston, October 1997.
  108. "Combinatorial Optimization in Networks for Process Synthesis", DIMACS Conference on Networks, Princeton, April 1997.
  109. "Global Optimization of MINLPs in Process Synthesis and Design", ESCAPE-PSE'97, Trondheim, Norway, May 1997.
  110. "Global Optimization in Parameter Estimation of Nonlinear Models", Annual AIChE Meeting, Los Angeles, November 1997.
  111. "Global Optimization of MINLPs in Process Synthesis and Design", Annual AIChE Meeting, Los Angeles, November 1997.
  112. "Predicting Solvated Conformations of Oligopeptides via Global Optimization", Annual AIChE Meeting, Los Angeles, November 1997.
  113. "Short-Term Scheduling of Batch and Continuous Plants" Annual AIChE Meeting, Los Angeles, November 1997.
  114. "A Predictive Method for the Peptide Binding in Pocket 1 of HLA-DRB1 via Global Minimization of Energy Interactions", Annual AIChE Meeting, Los Angeles, November 1997.
  115. "Protein Folding and Peptide Docking : A Molecular Modeling and Global Optimization Approach", ESCAPE'98 Meeting, Brugge, Belgium, May 1998.
  116. "Parameter Estimation in Nonlinear Algebraic Models via Global Optimization", ESCAPE'98 Meeting, Brugge, Belgium, May 1998.
  117. "Short Term Scheduling : New Mathematical Models vs Algorithmic Improvements", ESCAPE'98 Meeting, Brugge, Belgium, May 1998.
  118. "Global Optimization in Design and Control of Chemical Processes", DYCOPS'98, Corfu, Greece, June 1998.
  119. "Process Synthesis, Design and Control : A Mixed Integer Optimal Control Framework", DYCOPS'98, Corfu, Greece, June 1998.
  120. "Locating All Transition States", Annual AIChE Meeting, Miami, Florida, November 1998.
  121. "Free Energy Calculations of Peptides via Global Optimization", Annual AIChE Meeting, Miami, Florida, November 1998.
  122. "Continuous Time Formulations for Scheduling with Intermediate Due Dates", Annual AIChE Meeting, Miami, Florida, November 1998.
  123. "Optimal Location of Vertical Wells : A Decomposition Approach", Annual AIChE Meeting, Miami, Florida, November 1998.
  124. "Global Optimization with Differential Algebraic Problems", Annual AIChE Meeting, Miami, Florida, November 1998.
  125. "Global Optimization in Phase Equilibrium with Equations of State", Annual AIChE Meeting, Miami, Florida, November 1998.
  126. "Locating All Heterogeneous and Reactive Azeotropes", Annual AIChE Meeting, Miami, Florida, November 1998.
  127. "Recent Advances in Global Optimization", invited talk, National AIChE meeting, Houston, March 1999.
  128. "Synthesis of Optimal Chemical Reactor Networks", ESCAPE-9, Budapest, Hungary, May 1999.
  129. "Deterministic Global Optimization in Free Energy Calculations", Optimization in Computational Chemistry and Molecular Biology Conference, Princeton University, May 1999.
  130. "Dynamics of Peptide Folding : Transition States and Reaction Pathways", Optimization in Computational Chemistry and Molecular Biology Conference, Princeton University, May 1999.
  131. "Optimization in Computational Chemistry and Molecular Biology", Annual AIChE Meeting, Dallas, November 1999.
  132. "Design, Synthesis and Scheduling of Multiproduct Batch Plants" Annual AIChE Meeting, Dallas, November 1999.
  133. "Continuous Approaches for Mixed Integer Nonlinear Optimization", Annual AIChE Meeting, Dallas, November 1999.
  134. "Global Optimization of Nonlinear Bilevel Programming Problems", Annual AIChE Meeting, Dallas, November 1999.
  135. "Synthesis and Optimal Control of Complex Chemical Reactor Systems via Global Optimization", Annual AIChE Meeting, Dallas, November 1999.
  136. "Phase Equilibrium Calculations in Reactive Distillation Systems : A Global Optimization Approach", Annual AIChE Meeting, Dallas, November 1999.
  137. "Global Optimization in Design under Uncertainty : Feasibility Test and Flexibility Index", Annual AIChE Meeting, Dallas, November 1999.
  138. "NMR Structure Refinement via Deterministic Global Optimization", Annual AIChE Meeting, Dallas, November 1999.
  139. "Dynamics of Peptide Folding : Transition States and Reaction Pathways", Annual AIChE Meeting, Dallas, November 1999.
  140. "Global Optimization of Nonconvex Problems with Differential Algebraic Models", ESCAPE-10 Conference, Florence, Italy, May 2000.
  141. "Understanding Beta Sheet Folding Through Reaction Pathways on Potential Energy Surfaces", Annual AIChE Meeting, Los Angeles, November 2000.
  142. "Continuous time Optimization Approach for Medium Range Production Scheduling", Annual AIChE Meeting, Los Angeles, November 2000.
  143. "A Novel Continuous time Modelling and Optimization Framework for Well Platform Planning Problems", Annual AIChE Meeting, Los Angeles, November 2000.
  144. "Deterministic Global Optimization and Torsion Angle Dynamics for Protein Structure Prediction", Annual AIChE Meeting, Los Angeles, November 2000.
  145. "The Peptide Docking Problem", Annual AIChE Meeting, Los Angeles, November 2000.
  146. "EQUISTAR: A Computational Tool for Phase Equilibrium Calculations", ESCAPE 11, Denmark, May 2001.
  147. "Bilevel Nonlinear Optimization: A Global Optimization Approach", ESCAPE 11, Denmark, May 2001.
  148. "Global Optimization for General Bilevel Problems", INFORMS, Maui, June 2001.
  149. "Recent Advances in Deterministic Global Optimization", Optimization in Industry, Great Keppel Island, Australia, July 2001.
  150. "Global Optimization in Bilevel Nonlinear Problems", EURO-2001, Rotterdam, July 2001.
  151. "Ab initio Prediction of Helices", Annual AIChE Meeting, Reno, Nevada, 2001.
  152. "Prediction of beta stands, beta sheets and disulfide bridges", Annual AIChE Meeting, Reno, Nevada, 2001.
  153. "Tertiary Structure Prediction of Proteins", Annual AIChE Meeting, Reno, Nevada, 2001.
  154. "Global Optimization of Grey Box Models", Annual AIChE Meeting, Reno, Nevada, 2001.
  155. "A New Robust Optimization Approach for Scheduling under Uncertainty", Annual AIChE Meeting, Reno, Nevada, 2001.
  156. "Lightering Fleet Scheduling via a Novel Continuous-Time Formulation", Annual AIChE Meeting, Reno, Nevada, 2001.
  157. "Azeotrope Prediction under Model Parameter Uncertainty" Annual AIChE Meeting, Reno, Nevada, 2001.
  158. "Convex Envelopes for Multilinear Functions", Annual AIChE Meeting, Indianapolis, November 2002.
  159. "Generalized aBB Global Optimization Approach: Improved Convex Underestimators", Annual AIChE Meeting, Indianapolis, November 2002.
  160. "Analysis and Prediction of Loop Segments in Protein Structures" Annual AIChE Meeting, Indianapolis, November 2002.
  161. "Novel Predictive Framework for De Novo Peptide Design", Annual AIChE Meeting, Indianapolis, November 2002.
  162. "Predicting Peptide Binding to MHC Molecules via Poisson-Boltzmann Electrostatics and Global Optimization", Annual AIChE Meeting, Indianapolis, November 2002.
  163. "A Novel Mathematical Framework for Elucidating the Topology of Pathways in Yeast", Annual AIChE Meeting, Indianapolis, November 2002.
  164. "Hybrid Global Optimization Algorithms for Protein Structure Prediction", Annual AIChE Meeting, Indianapolis, November 2002.
  165. "ASTRO-FOLD: Ab Initio Protein Structure Prediction", CASP5 conference, Asilomar, CA, December 2002.
  166. "Opportunities and Challenges for Research Collaboration Between Academia and Industry", Foundations of Computer Aided Process Operations 2003, FOCAPO 2003, Coral Springs, FL, January 2003.
  167. "A New Class of Convex Underestimators for Global Optimization", Frontiers in Global Optimization, Santorini, Greece, June 2003.
  168. "New Pairwise Folding Potentials based on Improved Decoy Generation and Side Chain Packing", Annual AIChE meeting, San Francisco, November 2003.
  169. "A New Modeling and Optimization Approach for the Prediction of Helix Packing in Proteins", Annual AIChE meeting, San Francisco, November 2003.
  170. "A Robust Optimization Approach in Scheduling Under Uncertainty", Annual AIChE meeting, San Francisco, November 2003.
  171. "Global Solution Approach for a Nonconvex MINLP Problem in Product Portfolio Optimization", Annual AIChE meeting, San Francisco, November 2003.
  172. "A Piecewise Approach to the Convex Underestimation of Twice Continuously Differentiable Functions", Annual AIChE meeting, San Francisco, November 2003.
  173. "The Role of Off-Diagonal Elements of the Hessian Matrix in the Construction of Tight Convex Underestimators of Nonconvex Functions", Annual AIChE meeting, San Francisco, November 2003.
  174. "Global Optimization in Mixed Integer Nonlinear Bilevel Programming", Annual AIChE meeting, San Francisco, November 2003.
  175. "Global Optimization of Large Scale Pooling Problems", Annual AIChE meeting, San Francisco, November 2003.
  176. "Advances in Protein Folding via Scientific Computing" Picasso Seminar Program, Princeton University, February 2004.
  177. "Perspectives on FOCAPD-2004", Annual AIChE meeting, Austin, Texas, November 2004.
  178. "A Novel Global Optimization Algorithm for Large Scale Pooling Problems", Annual AIChE meeting, Austin, Texas, November 2004.
  179. "A Novel Mathematical Framework for Reducing the Integrality Gap in Short-Term Scheduling Problems", Annual AIChE meeting, Austin, Texas, November 2004.
  180. "An Improved Continuous-Time Formulation for Short-Term Scheduling Problems with Resource Constraints", Annual AIChE meeting, Austin, Texas, November 2004.
  181. "A Novel Mathematical Framework for Elucidating the Topology of Signal Transduction Networks under Uncertainty", Annual AIChE meeting, Austin, Texas, November 2004.
  182. "Prediction of Helical Topology in Membrane Proteins", Annual AIChE meeting, Austin, Texas, November 2004.
  183. "Advances in Robust Optimization for Scheduling under Uncertainty", ESCAPE-15, Barcelona, Spain, May 2005.
  184. "A Novel De Novo Protein Design Approach with Flexible Templates", ACS meeting, San Diego, California, March 2005.
  185. "A novel and effective integer optimization approach for the NSF panel assignment problem", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  186. "Protein Loop Structure Prediction with Flexible Stems", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  187. "Short-term, medium-term and reactive scheduling of an industrial polymer compounding plant", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  188. "Distance-dependent force field using a high resolution decoy set", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  189. "Global Optimization in Refinery Planning", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  190. "A Comparative Study of Continuous-time Models for Short-term Scheduling in Multipurpose Batch Plants", Annual AIChE Meeting, Cincinnati, OH, November 2005.
  191. "A novel and effective integer optimization approach for the NSF panel assignment problem", INFORMS Annual Meeting, San Francisco, November 2005.
  192. "Slot-based vs Global Event-based vs Unit-Specific Event based Continuous time Approaches for Short-Term Scheduling", ESCAPE-16/PSE-2006, Garmisch, Germany, July 2006.
  193. "Novel Classes of Tight Convex Underestimators for General Twice Continuously Differentiable Functions", ISMP-2006, Rio de Janeiro, Brazil, August 2006.
  194. "Tight Convex Underestimators for Arbitrary C2-Continuous Functions", Annual AIChE Meeting, San Francisco, November 2006.
  195. "Medium and Short-term Scheduling of a Large Industrial Continuous Plant", Annual AIChE Meeting, San Francisco, November 2006.
  196. "Improving the Integrality Gap using A novel Continuous-Time Scheduling Formulation Applied to a Challenging Industrial Benchmark Problem", Annual AIChE Meeting, San Francisco, November 2006.
  197. "De Novo Protein Design with Flexible Templates and Its Application to the Redesign of Complement 3a", Annual AIChE Meeting, San Francisco, November 2006.
  198. "De Novo peptide Identification via Mixed-Integer Linear Optimization and Tandem Mass Spectrometry", Annual AIChE Meeting, San Francisco, November 2006.
  199. "A Novel Computational Framework for the Rational Design of Shape Selective Separation and Catalysis", Annual AIChE Meeting, San Francisco, November 2006.
  200. "A Novel Approach for Alpha-Helical Topology Prediction in Globular Proteins", Annual AIChE Meeting, San Francisco, November 2006.
  201. "An Improved Continuous-Time Model for Short-term Scheduling of Continuous Processes: Rigorous Treatment of Storage Requirement", Annual AIChE Meeting, San Francisco, November 2006.
  202. "A High Resolution Side Chain Centroid Based Distance Dependent Force Field", Annual AIChE Meeting, San Francisco, November 2006.
  203. "Microarray Data Mining: A Novel Optimization-based Iterative Clustering Approach to Uncover Biologically Coherenr Structures", Annual AIChE Meeting, San Francisco, November 2006.
  204. "Short-term, Medium-term and Reactive Scheduling of an Industrial Polymer Batch Plant", Annual AIChE Meeting, San Francisco, November 2006.
  205. "A Novel Optimization-based Clustering Approach and Prediction of Optimal Number of Clusters", Annual AIChE Meeting, San Francisco, November 2006.
  206. "Global Pairwise Sequence Alignment Using Integer Linear Optimization: A Path Selection Approach", Annual AIChE Meeting, San Francisco, November 2006.
  207. "Redesigning Complement 3a and an HIV-1 Gp41 Inhibitor using a New De Novo Protein Design Approacj", First International Conference on Biomolecular Engineering, Coronado Island, January 2007.
  208. "De Novo Protein Design in Computational Genomics and Drug Discovery", AIChE National Capital Section, Washington, DC, May 2007.
  209. "De Novo Peptide Identification via Mixed Integer Linear Optimization and Tandem Mass Spectrometry", ESCAPE-17, Bucharest, Romania, May 2007
  210. "A New De Novo Approach for Optimizing Peptides that inhibit HIV-1 Entry", ESCAPE-17, Bucharest, Romania, May 2007
  211. "Tight Convex Underestimators for C2 -Continuous Problems", International Conference on Advances In Global Optimization: Methods and Applications, Myconos, Greece, June 13-17, 2007.
  212. "A novel computational framework for the optimal design of a protein biosensor that recognizes a known set of ligands", Annual AIChE Meeting, Salt Lake City, November 2007.
  213. "De novo protein design with flexible backbone templates and its application to the redesign of complement C3a", Annual AIChE Meeting, Salt Lake City, November 2007.
  214. "A new optimization based approach for protein residue contact prediction", Annual AIChE Meeting, Salt Lake City, November 2007.
  215. "Inferring large scale gene regulatory structures using optimization based approaches", Annual AIChE Meeting, Salt Lake City, November 2007.
  216. "Frontiers of shape selective separation", Annual AIChE Meeting, Salt Lake City, November 2007.
  217. "Rational design of shape selective separation and catalysis", Annual AIChE Meeting, Salt Lake City, November 20.
  218. "Operational planning of a multi-site production and distribution network", Annual AIChE Meeting, Salt Lake City, November 2007.
  219. "Peptide identification via integer linear optimization, local alignment database search and tandem mass spectrometry", Annual AIChE Meeting, Salt Lake City, November 2007.
  220. "Operational planning and medium-term scheduling of a large scale industrial batch plant", Annual AIChE Meeting, Salt Lake City, November 2007.
  221. "A global optimization algorithm for multi-linear programming and its application to the pooling problem", Annual AIChE Meeting, Salt Lake City, November 2007.
  222. "RTN based framework for short term scheduling of batch plants using unit-specific event-based continuous-time approach", Annual AIChE Meeting, Salt Lake City, November 2007.
  223. "A novel unified modeling approach for short-term scheduling", Annual AIChE Meeting, Salt Lake City, November 2007.
  224. "A novel approach for accelerating molecular discovery of sparsely sampled libraries", Annual AIChE Meeting, Salt Lake City, November 2007.
  225. "Biclustering via optimal ordering", Annual AIChE Meeting, Salt Lake City, November 2007.
  226. "Computational comparison of piecewise linearization schemes for gas lifting and pooling problems", Annual AIChE Meeting, Philadelphia,November 2008.
  227. "De novo protein design of C5a", Annual AIChE Meeting, Philadelphia, November 2008.
  228. "A novel mixed-integer linear optimization framework for identification of post translationally modified proteins using ETD/ECD tandem mass spectrometry", Annual AIChE Meeting, Philadelphia, November 2008.
  229. "Integrated operational planning and medium term scheduling of a large scale industrial batch plant under uncertainty", Annual AIChE Meeting, Philadelphia, November 2008.
  230. "Operational planning of a large scale industrial plant under uncertainty", Annual AIChE Meeting, Philadelphia, November 2008.
  231. "De novo identification of biomarker proteins using tandem mass spectrometry", Annual AIChE Meeting, Philadelphia, November 2008.
  232. "De novo protein design based on binding affinity predictions for the discovery of novel inhibitors for complement 3 and HIV-1", Annual AIChE Meeting, Philadelphia, November 2008.
  233. "Globally Optimizing an Extended Pooling Problem", Annual INFORMS Meeting, San Diego, October 2009.
  234. "Global optimization of large-scale extended pooling problems with EPA complex emissions model" Annual AIChE Meeting, Nashville, November 2009.
  235. " Operational planning of a multi-site production and distribution network under uncertainty" Annual AIChE Meeting, Nashville, November 2009.
  236. "Optimal portfolio selection under uncertainty" Annual AIChE Meeting, Nashville, November 2009.
  237. "A de novo approach for untargeted post-translational modification prediction using tandem mass spectrometry and integer linear optimization" Annual AIChE Meeting, Nashville, November 2009.
  238. "Optimal event point determination for short term scheduling of multipurpose batch plants" Annual AIChE Meeting, Nashville, November 2009.
  239. "Sequential and simultaneous secondary structure prediction for globular proteins" Annual AIChE Meeting, Nashville, November 2009.
  240. "Predicting in vivo toxicities using optimal methods for re-ordering and machine learning" Annual AIChE Meeting, Nashville, November 2009.
  241. "Selecting high quality protein structures from diverse conformational ensembles" Annual AIChE Meeting, Nashville, November 2009.
  242. "Towards hybrid biomass and coal processes for satisfying current transportation fuel demands", 2nd Annual Gas processing Symposium, Doha, Qatar, January 2010.
  243. "Global Optimization and Parametric Analysis of Large-Scale Extended Pooling Problems", Escape 20, Ischia, Italy, June 2010.
  244. "Global Optimization of Large Scale Generalized Pooling Problems", EURO-2010, Lisbon, Portugal, July 2010.
  245. "Global Optimization of Large Scale Extended and Generalized Pooling Problems: Mixed Integer Nonlinearly Constrained Models", Toulouse Global Optimization Workshop, TOGO-2010, Toulouse, France, September 2010.
  246. "Globally optimal nesting of irregular shapes into a limited resourcse", Annual AIChE Meeting, Salt Lake City, November 2010.
  247. "Large scale global optimization of generalized and extended pooling problems", Annual AIChE Meeting, Salt Lake City, November 2010.
  248. "De novo protein design of a conformational switch between a helical protein and a mixed a/b protein", Annual AIChE Meeting, Salt Lake City, November 2010.
  249. "A novel framework for beta sheet topology prediction in purely beta and mixed alpha-beta proteins", Annual AIChE Meeting, Salt Lake City, November 2010.
  250. "A novel framework for three dimensional shape induced reaction selectivity in zeolite structures", Annual AIChE Meeting, Salt Lake City, November 2010.
  251. "A novel approach for modified protein identification", Annual AIChE Meeting, Salt Lake City, November 2010.
  252. "A new modeling and global optimization approach for scheduling of crude oil operations", Annual AIChE Meeting, Salt Lake City, November 2010.
  253. "A hybrid approach for the exact solution of the capacitated vehicle routing problem", Annual AIChE Meeting, Salt Lake City, November 2010.
  254. "Optimal energy supply network determination for hybrid coal, biomass and natural has to liquid, CBGTL, plants", Annual AIChE Meeting, Salt Lake City, November 2010.
  255. "The construction of networks with prescribed collective properties", Annual AIChE Meeting, Salt Lake City, November 2010.
  256. "Iterative loop structure prediction using flexible and fixed stem geometries", Annual AIChE Meeting, Salt Lake City, November 2010.
  257. "New advances in the first principles protein structure prediction method AstroFold", Annual AIChE Meeting, Salt Lake City, November 2010.
  258. "Network design problems with prescribed degree dependent clustering", SEA-2011 Conference, Chania, Crete, Greece, May 2011.
  259. "Global Optimization of Quadratically Constrained Quadratic Programming Problems", 2nd World Congress on Global Optimization, Chania, Crete, Greece, July 2011.
  260. "A First Principles Based Structure Prediction Algorithm for Beta and Mixed Alpha/Beta Proteins", Annual AIChE Meeting, Minneapolis, October 2011.
  261. "Global Optimization of Mixed-Integer Quadratically-Constrained Quadratic Programs (QCQP) Through Piecewise-Linear and Edge-Concave Relaxations", Annual AIChE Meeting, Minneapolis, October 2011.
  262. "Nationwide Energy Supply Chain Analysis for Transportation Fuels", Annual AIChE Meeting, Minneapolis, October 2011.
  263. "Global Optimization of Thermochemical-Based Coal, Biomass, and Natural Gas to Liquids Processes Via Lograthmic Partioning Schemes ", Annual AIChE Meeting, Minneapolis, October 2011.
  264. "An Improved De Novo Peptide Sequencing Framework Using Decomposition and Integer Linear Optimization", Annual AIChE Meeting, Minneapolis, October 2011.
  265. "Prediction Framework and Experimental Validation of Peptide Binding to Three MHC Class II Alleles", Annual AIChE Meeting, Minneapolis, October 2011.
  266. "Integrated Operational Planning and Medium-Term Scheduling for Large-Scale Industrial Semicontinuous/Continuous Processes", Annual AIChE Meeting, Minneapolis, October 2011.
  267. "De Novo Protein Design of Agonists and Antagonists of the C3a Receptor: Theoretical Predictions and Experimental Validation", Annual AIChE Meeting, Minneapolis, October 2011.
  268. "PILOT PROTEIN: A High-Throughput Method for In Silico Discovery of Peptides, Proteins, and Post-Translational Modifications ", Annual AIChE Meeting, Minneapolis, October 2011.
  269. "Uncertainty Set Induced Robust Linear and Mixed Inter Linear Optimization and Their Probabilistic Guarantees: New Results & Comparative Study", Annual AIChE Meeting, Minneapolis, October 2011.
  270. "Scheduling of Crude Oil Operations Under Uncertainty: A Robust Optimization Framework Coupled with Global Optimization ", Annual AIChE Meeting, Minneapolis, October 2011.
  271. "Robust Optimization of the Capacitated Vehicle Routing Problem Under Demand Uncertainty ", Annual AIChE Meeting, Minneapolis, October 2011.
  272. "Optimization Framework for the Process Synthesis and Simultaneous Heat and Power Integration of a Thermochemical Coal, Biomass, and Natural Gas to Liquids Facility", Annual AIChE Meeting, Minneapolis, October 2011.
  273. "Loop Structure Prediction for Fixed-Stem Geometries In Proteins", Annual AIChE Meeting, Minneapolis, October 2011.
  274. "Optimization of Reaction Networks In Zeolites", Annual AIChE Meeting, Minneapolis, October 2011.
  275. "Global Optimization of MINLP Process Synthesis Models of Hybrid Energy Processes", Annual INFORMS Meeting, Charlotte, NC, November 2011.
  276. "Global Optimization of Mixed Integer Quadratically Constrained Quadratic Optimization Problems", INFORMS International, Beijing, June 2012.
  277. "GloMIQO: Global Optimization of MIQCQP Problems", EURO 2012, Vilnius, July 2012.
  278. "Global Optimization of MIQCQP Models", ISMP-2012, Berlin, August 2012.
  279. "Global Optimization Framework for Mixed Integer Signomial Problems", Annual INFORMS Conference, Pheonix, Arizona, October 2012.
  280. "New Classes of Convex Underestimators for Global Optimization", SIAM Conference on Optimization, May 2014.
  281. "Advances in deterministic global optimization for MINLP models", MINLP 2014 Workshop, Carnegie Mellon University, Pittsburgh, June 2014.